RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA929522" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA929522 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16208295 16208295 PRJNA929522_S_NODE_5033_length_310_cov_0.974684_g4963_i0 PRJNA929522 5033 310 0.974684 3.0215204 Halorussus halophilus 2650975 Archaea Archaea 54.7 0.008   NTclustered gi|1757107050|gb|CP044523.1| 2650975 g4963 i0 94.444 0.390322580645161 36 1 11 1 203 237 3176436 3176401 Halorussus halophilus strain ZS-3 chromosome, complete genome blastn 121 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Halorussus Halorussus halophilus
18756886 18756886 PRJNA929522_S_NODE_5695_length_295_cov_1.333333_g5625_i0 PRJNA929522 5695 295 1.333333 3.93333235 Thermoplasmatales archaeon 2268204 Archaea Archaea 62.1 4.55e-5   NTclustered gi|2573961727|gb|CP133596.1| 2268204 g5625 i0 100 0.213559322033898 33 0 11 0 8 40 518122 518154 MAG: Thermoplasmatales archaeon isolate BR_05 chromosome, complete genome blastn 63 62.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;