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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA929522" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 14 ✖

bioproject 1

  • PRJNA929522 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2180709 2180709 PRJNA929522_S_NODE_1522_length_533_cov_2.223913_g1452_i0 PRJNA929522 1522 533 2.223913 11.85345629 Physarum polycephalum 5791 Evosea other_Eukaryota 346 2.14e-90   NTclustered gi|156151273|dbj|AB300196.1| 5791 g1452 i0 78.571 24.8180112570356 532 108 99 6 4 532 1617 1089 Physarum polycephalum hsp90 mRNA for heat shock protein 90, partial cds blastn 13228 346 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
5081756 5081756 PRJNA929522_S_NODE_4344_length_328_cov_34.482353_g4274_i0 PRJNA929522 4344 328 34.482353 113.10211784 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 259 1.69e-64   NTclustered gi|159082997|gb|EF513198.1| 435421 g4274 i0 85.214 48.6585365853659 257 33 78 5 1 255 254 1 Schizoplasmodiopsis vulgaris elongation factor 1A (EF1A) gene, partial cds blastn 15960 259 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida   Schizoplasmodiopsis Schizoplasmodiopsis vulgaris
7631554 7631554 PRJNA929522_S_NODE_1866_length_486_cov_2.474576_g1796_i0 PRJNA929522 1866 486 2.474576 12.02643936 Vannellidae 95227 Discosea other_Eukaryota 712 0   NTclustered gi|62865947|gb|AY929922.1| 325065 g1796 i0 93.469 101.030864197531 490 14 100 14 1 486 1660 1185 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 49101 712 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
8906237 8906237 PRJNA929522_S_NODE_5967_length_289_cov_7.958333_g5897_i0 PRJNA929522 5967 289 7.958333 22.99958237 Ripella 1217112 Discosea other_Eukaryota 431 2.94e-116   NTclustered gi|1269228437|gb|MF683562.1| 2047822 g5897 i0 96.923 87.5882352941177 260 3 89 5 1 257 948 691 Ripella decalvata clone 15101 18S ribosomal RNA gene, partial sequence blastn 25313 433 0.995381062355658 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
11108951 11108951 PRJNA929522_S_NODE_6709_length_277_cov_1.073529_g6639_i0 PRJNA929522 6709 277 1.073529 2.97367533 Dictyostelium purpureum 5786 Evosea other_Eukaryota 193 1.44e-44   NTclustered gi|330841158|ref|XM_003292522.1| 5786 g6639 i0 79.783 17.4115523465704 277 46 98 9 4 275 482 211 Dictyostelium purpureum 3-methyl-2-oxobutanoate dehydrogenase (DICPUDRAFT_157306), partial mRNA blastn 4823 193 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
12384419 12384419 PRJNA929522_S_NODE_2050_length_464_cov_1.524297_g1980_i0 PRJNA929522 2050 464 1.524297 7.07273808 Lamproderma scintillans 1115720 Evosea other_Eukaryota 418 3.859999999999999e-112   NTclustered gi|2306687673|gb|MZ234286.1| 1115720 g1980 i0 83.778 65.073275862069 450 63 96 8 20 464 457 13 Lamproderma scintillans voucher LE297459 translation elongation factor EF-1 alpha (EF1A) gene, partial cds blastn 30194 418 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Lamproderma Lamproderma scintillans
12384471 12384471 PRJNA929522_S_NODE_9570_length_244_cov_1.350877_g9500_i0 PRJNA929522 9570 244 1.350877 3.29613988 Echinostelium bisporum 1973072 Evosea other_Eukaryota 396 8.829999999999997e-106   NTclustered gi|1465309735|gb|MH809395.1| 1973072 g9500 i0 95.902 98.2459016393443 244 10 100 0 1 244 563 320 Echinostelium bisporum isolate Nx14-A1 small subunit ribosomal RNA gene, partial sequence blastn 23972 396 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Echinosteliales Echinosteliidae Echinostelium Echinostelium bisporum
13658987 13658987 PRJNA929522_S_NODE_4391_length_327_cov_1.535433_g4321_i0 PRJNA929522 4391 327 1.535433 5.02086591 Physarum polycephalum 5791 Evosea other_Eukaryota 110 1.8e-19   NTclustered gi|3221|emb|V01159.1| 5791 g4321 i0 84.211 16.3333333333333 114 17 35 1 209 322 1243 1131 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 5341 110 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
16208312 16208312 PRJNA929522_S_NODE_793_length_705_cov_6.026899_g732_i0 PRJNA929522 793 705 6.026899 42.48963795 Ripella sp. 805 1217113 Discosea other_Eukaryota 887 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g732 i0 95.668 79.3475177304964 554 20 78 4 1 553 551 1 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 55940 887 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
16555956 16555956 PRJNA929522_S_NODE_9713_length_243_cov_1.358824_g9643_i0 PRJNA929522 9713 243 1.358824 3.30194232 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 56.5 0.002   NTclustered gi|330803666|ref|XM_003289777.1| 5786 g9643 i0 100 1.81069958847737 30 0 12 0 141 170 866 895 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_94994), mRNA blastn 440 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
18756906 18756906 PRJNA929522_S_NODE_7835_length_259_cov_1.559140_g7765_i0 PRJNA929522 7835 259 1.55914 4.0381726 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 219 2.2e-52   NTclustered gi|470423206|ref|XM_004337526.1| 1257118 g7765 i0 81.992 36.3861003861004 261 43 100 4 1 259 481 223 Acanthamoeba castellanii str. Neff 3oxoacid CoA transferase 1 isoform 3, putative (ACA1_164100), partial mRNA blastn 9424 219 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23857685 23857685 PRJNA929522_S_NODE_2019_length_469_cov_1.166667_g1949_i0 PRJNA929522 2019 469 1.166667 5.47166823 Dictyostelium purpureum 5786 Evosea other_Eukaryota 313 1.89e-80   NTclustered gi|330844711|ref|XM_003294212.1| 5786 g1949 i0 79.861 19.4605543710021 432 83 92 4 40 469 614 185 Dictyostelium purpureum succinyl coenzyme A synthetase alpha subunit (DICPUDRAFT_159229), partial mRNA blastn 9127 313 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
25131480 25131480 PRJNA929522_S_NODE_3020_length_384_cov_3.704180_g2950_i0 PRJNA929522 3020 384 3.70418 14.2240512 Protostelium mycophagum 472931 Evosea other_Eukaryota 87.9 1e-12   NTclustered gi|262262904|gb|FJ766447.1| 472931 g2950 i0 81.731 16.5078125 104 19 27 0 7 110 1195 1298 Protostelium mycophagum strain HI06-7A-1 small subunit ribosomal RNA gene, partial sequence blastn 6339 87.9 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
25131482 25131482 PRJNA929522_S_NODE_3080_length_381_cov_1.500000_g3010_i0 PRJNA929522 3080 381 1.5 5.715 Heterostelium album 2086695 Evosea other_Eukaryota 246 1.55e-60   NTclustered gi|1160575144|ref|XM_020582312.1| 670386 g3010 i0 80.243 2.53280839895013 329 63 86 2 1 328 1151 1478 Polysphondylium pallidum PN500 propionyl-CoA carboxylase (pccB), partial mRNA blastn 965 246 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;