contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA928559" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3805048 | 3805048 | PRJNA928559_P_NODE_22743_length_670_cov_4.775544_g21253_i0 | PRJNA928559 | 22743 | 670 | 4.775544 | 31.9961448 | Turneriella | 338321 | Bacteria | Bacteria | 1029 | 0 | NTclustered | gi|470489162|ref|NR_076910.1| | 29510 | g21253 | i0 | 94.486 | 232.083582089552 | 671 | 32 | 99 | 5 | 1 | 668 | 775 | 107 | Turneriella parva strain DSM 21527 23S ribosomal RNA gene, complete sequence | blastn | 155496 | 1029 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Turneriella | Turneriella parva | ||
| 6006112 | 6006112 | PRJNA928559_P_NODE_16925_length_763_cov_2.694203_g15513_i0 | PRJNA928559 | 16925 | 763 | 2.694203 | 20.55676889 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 148 | 9.49e-31 | NTclustered | gi|2649718696|emb|OZ001226.1| | 2202144 | g15513 | i0 | 80.193 | 18.8335517693316 | 207 | 34 | 27 | 5 | 158 | 360 | 74345 | 74548 | MAG: Spirochaetota bacterium isolate 8b34eeeb-0c33-43c6-8155-d1d64b2f6b4c genome assembly, chromosome: 19 | blastn | 14370 | 148 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 6356877 | 6356877 | PRJNA928559_P_NODE_175885_length_262_cov_5.021164_g174316_i0 | PRJNA928559 | 175885 | 262 | 5.021164 | 13.15544968 | Turneriella | 338321 | Bacteria | Bacteria | 411 | 3.419999999999999e-110 | NTclustered | gi|470489162|ref|NR_076910.1| | 29510 | g174316 | i0 | 95.057 | 149.599236641221 | 263 | 9 | 99 | 2 | 2 | 260 | 1214 | 1476 | Turneriella parva strain DSM 21527 23S ribosomal RNA gene, complete sequence | blastn | 39195 | 411 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Turneriella | Turneriella parva | ||
| 7631096 | 7631096 | PRJNA928559_P_NODE_217426_length_238_cov_3.903030_g215857_i0 | PRJNA928559 | 217426 | 238 | 3.9030300000000002 | 9.2892114 | Treponema | 157 | Bacteria | Bacteria | 435 | 1.8200000000000003e-117 | NTclustered | gi|1826584176|gb|MT257120.1| | 162155 | g215857 | i0 | 99.58 | 149.794117647059 | 238 | 1 | 100 | 0 | 1 | 238 | 596 | 359 | Uncultured Treponema sp. clone BOC15 23S ribosomal RNA gene, partial sequence | blastn | 35651 | 435 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | uncultured Treponema sp. | ||
| 11456575 | 11456575 | PRJNA928559_P_NODE_170129_length_268_cov_1.333333_g168560_i0 | PRJNA928559 | 170129 | 268 | 1.333333 | 3.57333244 | Entomospira | 2834378 | Bacteria | Bacteria | 158 | 5.05e-34 | NTclustered | gi|2446641004|gb|CP118168.1| | 2719987 | g168560 | i0 | 77.941 | 212.847014925373 | 272 | 46 | 99 | 13 | 1 | 264 | 323022 | 323287 | Entomospira nematocerorum strain BR208 chromosome | blastn | 57043 | 158 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Entomospira | Entomospira nematocerorum | ||
| 12732280 | 12732280 | PRJNA928559_P_NODE_180250_length_259_cov_1.268817_g178681_i0 | PRJNA928559 | 180250 | 259 | 1.268817 | 3.28623603 | Leptospira | 171 | Bacteria | Bacteria | 169 | 2.24e-37 | NTclustered | gi|2777203535|gb|CP162142.1| | 3235171 | g178681 | i0 | 80.085 | 22.046332046332 | 236 | 40 | 90 | 6 | 21 | 253 | 2717395 | 2717164 | Leptospira iowaensis strain WS39.C2 chromosome 1, complete sequence | blastn | 5710 | 169 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira iowaensis | ||
| 14931944 | 14931944 | PRJNA928559_P_NODE_4072_length_1462_cov_27.092873_g3362_i0 | PRJNA928559 | 4072 | 1462 | 27.092873 | 396.09780326 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 143 | 8.65e-29 | NTclustered | gi|2649718696|emb|OZ001226.1| | 2202144 | g3362 | i0 | 81.461 | 10.5266757865937 | 178 | 30 | 12 | 3 | 653 | 828 | 74549 | 74373 | MAG: Spirochaetota bacterium isolate 8b34eeeb-0c33-43c6-8155-d1d64b2f6b4c genome assembly, chromosome: 19 | blastn | 15390 | 143 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 16205256 | 16205256 | PRJNA928559_P_NODE_128273_length_313_cov_20.783333_g126704_i0 | PRJNA928559 | 128273 | 313 | 20.783333 | 65.05183229 | Borrelia turcica | 229155 | Bacteria | Bacteria | 102 | 2.87e-17 | NTclustered | gi|1484376061|gb|CP028884.1| | 1104446 | g126704 | i0 | 86 | 0.603833865814696 | 100 | 8 | 31 | 6 | 126 | 222 | 776056 | 776152 | Borrelia turcica IST7 chromosome, complete genome | blastn | 189 | 102 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borrelia | Borrelia turcica | ||
| 16555625 | 16555625 | PRJNA928559_P_NODE_49973_length_484_cov_4.739659_g48411_i0 | PRJNA928559 | 49973 | 484 | 4.739659 | 22.93994956 | Turneriella | 338321 | Bacteria | Bacteria | 833 | 0 | NTclustered | gi|470489162|ref|NR_076910.1| | 29510 | g48411 | i0 | 98.316 | 246.45867768595 | 475 | 8 | 98 | 0 | 10 | 484 | 1211 | 737 | Turneriella parva strain DSM 21527 23S ribosomal RNA gene, complete sequence | blastn | 119286 | 833 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Turneriella | Turneriella parva | ||
| 24204315 | 24204315 | PRJNA928559_P_NODE_158239_length_279_cov_2.033981_g156670_i0 | PRJNA928559 | 158239 | 279 | 2.033981 | 5.67480699 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 115 | 3.23e-21 | NTclustered | gi|2581921758|dbj|AP025291.1| | 165 | g156670 | i0 | 97.059 | 119.530465949821 | 68 | 2 | 24 | 0 | 211 | 278 | 6763 | 6830 | Treponema saccharophilum JCM 32279 plasmid pTSrrn DNA, complete genome | blastn | 33349 | 115 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema saccharophilum | ||
| 25130119 | 25130119 | PRJNA928559_P_NODE_39640_length_531_cov_13.122271_g38084_i0 | PRJNA928559 | 39640 | 531 | 13.122271 | 69.67925901 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 165 | 6.42e-36 | NTclustered | gi|2649718696|emb|OZ001226.1| | 2202144 | g38084 | i0 | 83.616 | 44.7947269303202 | 177 | 28 | 33 | 1 | 356 | 531 | 74373 | 74549 | MAG: Spirochaetota bacterium isolate 8b34eeeb-0c33-43c6-8155-d1d64b2f6b4c genome assembly, chromosome: 19 | blastn | 23786 | 165 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;