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contig_metadata

26 rows where analysis = "blastn", bioproject = "PRJNA928559" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 26 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA928559 · 26 ✖

analysis 1

  • blastn · 26 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
903623 903623 PRJNA928559_P_NODE_219041_length_235_cov_4.024691_g217472_i0 PRJNA928559 219041 235 4.024691 9.45802385 Asplanchna sieboldii 84397 Rotifera other_Eukaryota 126 1.22e-24   NTclustered gi|14276850|gb|AF325131.1|AF325131 84397 g217472 i0 83.108 4.11914893617021 148 15 61 9 15 157 359 217 Asplanchna sieboldi 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product blastn 968 126 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sieboldii
903833 903833 PRJNA928559_P_NODE_26641_length_627_cov_5.055957_g25128_i0 PRJNA928559 26641 627 5.055957 31.70085039 Lecane elsa 360663 Rotifera other_Eukaryota 686 0   NTclustered gi|83285190|gb|DQ297737.1| 360663 g25128 i0 86.508 70.9808612440191 630 78 100 5 1 627 297 922 Lecane elsa 28S ribosomal RNA gene, partial sequence blastn 44505 686 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane elsa
2179143 2179143 PRJNA928559_P_NODE_27122_length_622_cov_83.224044_g25608_i0 PRJNA928559 27122 622 83.224044 517.65355368 Adineta vaga 104782 Rotifera other_Eukaryota 878 0   NTclustered gi|259129963|gb|GQ398061.1| 104782 g25608 i0 93.782 64.2475884244373 595 20 95 12 29 622 4059 4637 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 39962 878 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
3455064 3455064 PRJNA928559_P_NODE_56203_length_461_cov_34.327320_g54636_i0 PRJNA928559 56203 461 34.32732 158.2489452 Lepadella patella 231622 Rotifera other_Eukaryota 599 1.2699999999999993e-166   NTclustered gi|83285192|gb|DQ297739.1| 231622 g54636 i0 90.909 78.6963123644252 451 33 97 7 16 461 750 303 Lepadella patella 28S ribosomal RNA gene, partial sequence blastn 36279 599 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lepadellidae Lepadella Lepadella patella
4731042 4731042 PRJNA928559_P_NODE_151324_length_286_cov_2.328638_g149755_i0 PRJNA928559 151324 286 2.328638 6.65990468 Philodina roseola 96448 Rotifera other_Eukaryota 200 8.919999999999998e-47   NTclustered gi|194500491|gb|EU850441.1| 96448 g149755 i0 92.199 13.5559440559441 141 11 49 0 116 256 6767 6907 Philodina roseola dihydrogenpyrimidine dehydrogenase gene, partial cds; translation initiation factor eIF-4E, rho GTPase activating protein, 7 transmembrane protein 66, histone H4, histone H3, histone H2B, osteopetrosis associated transmembrane protein, cleft lip and palate associated transmembrane, ribosomal protein s15a, hypothetical protein 20, START domain containing protein, filament protein, hypothetical protein 21, and putative GPCR genes, complete cds; and hypothetical protein 22 gene, partial cds blastn 3877 200 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
6005473 6005473 PRJNA928559_P_NODE_128345_length_313_cov_3.916667_g126776_i0 PRJNA928559 128345 313 3.916667 12.25916771 Philodina roseola 96448 Rotifera other_Eukaryota 377 4.25e-100   NTclustered gi|187936070|gb|EU652317.1| 96448 g126776 i0 90.592 73.185303514377 287 24 91 2 30 313 21557 21271 Philodina roseola GTP binding protein, beta prime coatomer protein complex subunit, GPCR, beta-transducin repeat containing protein, speckle-type POZ protein, adenosine kinase, prefoldin subunit 1, translation initiation factor eIF-4E, Rho GTPase activating protein, histone H4, histone H3, histone H2B, histone H2Av, cleft lip and palate associated transmembrane protein, mitochondrial ribosomal protein s22, ribosomal protein s15a, hypothetical protein 20, START domain containing protein, and filament protein genes, complete cds blastn 22907 377 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
6005721 6005721 PRJNA928559_P_NODE_144645_length_293_cov_4.095455_g143076_i0 PRJNA928559 144645 293 4.095455 11.99968315 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 67.6 9.7e-7   NTclustered gi|1143271481|gb|KX822781.1| 104777 g143076 i0 100 2.54607508532423 36 0 12 0 38 73 6959 6994 Brachionus calyciflorus chromosome I mitochondrion, complete sequence blastn 746 67.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
6007446 6007446 PRJNA928559_P_NODE_58645_length_453_cov_29.263158_g57078_i0 PRJNA928559 58645 453 29.263158 132.56210574 Lepadella patella 231622 Rotifera other_Eukaryota 442 2.2299999999999992e-119   NTclustered gi|83285192|gb|DQ297739.1| 231622 g57078 i0 84.683 77.2825607064018 457 55 99 8 1 451 303 750 Lepadella patella 28S ribosomal RNA gene, partial sequence blastn 35009 442 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lepadellidae Lepadella Lepadella patella
6007651 6007651 PRJNA928559_P_NODE_75365_length_407_cov_2.245509_g73796_i0 PRJNA928559 75365 407 2.245509 9.13922163 Adineta vaga 104782 Rotifera other_Eukaryota 198 4.74e-46   NTclustered gi|259129963|gb|GQ398061.1| 104782 g73796 i0 76.962 0.97051597051597 395 62 94 21 1 383 3663 4040 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 395 198 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
8554999 8554999 PRJNA928559_P_NODE_119807_length_325_cov_2.337302_g118238_i0 PRJNA928559 119807 325 2.337302 7.5962315 Brachionus koreanus 1199090 Rotifera other_Eukaryota 124 6.3799999999999996e-24   NTclustered gi|477541870|gb|KC603851.1| 1199090 g118238 i0 75.618 9.90153846153846 283 52 85 16 50 324 5737 6010 Brachionus sp. 'koreanus' chromosome I mitochondrion, complete sequence blastn 3218 124 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus koreanus
8556904 8556904 PRJNA928559_P_NODE_43227_length_513_cov_6.627273_g41669_i0 PRJNA928559 43227 513 6.627273 33.99791049 Philodina roseola 96448 Rotifera other_Eukaryota 660 0   NTclustered gi|197321819|gb|EU853695.1| 96448 g41669 i0 92.457 64.1890838206628 464 32 90 2 1 464 461 1 Philodina roseola histone H2A variant H2Av1 copy 1a (H2Av1) gene, partial cds blastn 32929 660 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
9830571 9830571 PRJNA928559_P_NODE_162108_length_275_cov_2.623762_g160539_i0 PRJNA928559 162108 275 2.623762 7.2153455 Ploesoma truncatum 2851073 Rotifera other_Eukaryota 156 1.87e-33   NTclustered gi|83285204|gb|DQ297751.1| 2851073 g160539 i0 78.169 2.09818181818182 284 35 97 19 1 268 740 468 Ploesoma truncatus 28S ribosomal RNA gene, partial sequence blastn 577 156 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Synchaetidae Ploesoma Ploesoma truncatum
9831489 9831489 PRJNA928559_P_NODE_224548_length_223_cov_10.933333_g222979_i0 PRJNA928559 224548 223 10.933333 24.38133259 Philodina citrina 468664 Rotifera other_Eukaryota 265 2.34e-66   NTclustered gi|407227484|emb|FR856884.1| 468664 g222979 i0 90.547 41.304932735426 201 17 90 2 9 208 1858 2057 Philodina citrina complete mitochondrial genome blastn 9211 265 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
10181402 10181402 PRJNA928559_P_NODE_15188_length_801_cov_3.950549_g13829_i0 PRJNA928559 15188 801 3.950549 31.64389749 Brachionus 10194 Rotifera other_Eukaryota 108 1.69e-18   NTclustered gi|950655830|gb|KT151641.1| 183142 g13829 i0 72.506 5.23096129837703 411 86 50 24 208 605 547 151 Brachionus quadridentatus 12S ribosomal RNA gene, partial sequence; mitochondrial blastn 4190 108 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus quadridentatus
11105725 11105725 PRJNA928559_P_NODE_119909_length_325_cov_1.952381_g118340_i0 PRJNA928559 119909 325 1.952381 6.34523825 Habrotrocha constricta 104786 Rotifera other_Eukaryota 350 9.67e-92   NTclustered gi|402761789|gb|JX184026.1| 104786 g118340 i0 86.239 38.7476923076923 327 39 99 4 1 324 727 1050 Habrotrocha constricta cytochrome b (CYTB) gene, complete cds; mitochondrial blastn 12593 350 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
11456360 11456360 PRJNA928559_P_NODE_104129_length_349_cov_80.782609_g102560_i0 PRJNA928559 104129 349 80.782609 281.93130541 Ploima 84394 Rotifera other_Eukaryota 479 1.2799999999999996e-130   NTclustered gi|61200802|gb|AY829083.1| 96446 g102560 i0 95.364 83.6790830945559 302 13 87 1 48 349 1421 1721 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 29204 479 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
11456434 11456434 PRJNA928559_P_NODE_125489_length_317_cov_2.750000_g123920_i0 PRJNA928559 125489 317 2.75 8.7175 Ploima 84394 Rotifera other_Eukaryota 261 4.53e-65   NTclustered gi|83285183|gb|DQ297730.1| 360655 g123920 i0 82.428 59.3533123028391 313 42 97 10 10 317 605 301 Ascomorpha ovalis 28S ribosomal RNA gene, partial sequence blastn 18815 261 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Gastropidae Ascomorpha Ascomorpha ovalis
11456997 11456997 PRJNA928559_P_NODE_96629_length_362_cov_28.283737_g95060_i0 PRJNA928559 96629 362 28.283737 102.38712794 Ploima 84394 Rotifera other_Eukaryota 475 1.7199999999999995e-129   NTclustered gi|72153738|gb|DQ089740.1| 204736 g95060 i0 91.86 82.6823204419889 344 23 94 3 1 339 1389 1732 Brachionus urceolaris 28S ribosomal RNA gene, partial sequence blastn 29931 475 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus urceolaris
12381721 12381721 PRJNA928559_P_NODE_147430_length_290_cov_2.930876_g145861_i0 PRJNA928559 147430 290 2.930876 8.4995404 Brachionus patulus 160652 Rotifera other_Eukaryota 241 5.340000000000001e-59   NTclustered gi|14276851|gb|AF325132.1|AF325132 160652 g145861 i0 82.857 57.4379310344828 280 36 95 10 10 284 1 273 Brachionus patulus 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product blastn 16657 241 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus patulus
13656811 13656811 PRJNA928559_P_NODE_185391_length_254_cov_3.458564_g183822_i0 PRJNA928559 185391 254 3.458564 8.78475256 Philodina roseola 96448 Rotifera other_Eukaryota 235 2.13e-57   NTclustered gi|197321825|gb|EU853698.1| 96448 g183822 i0 88.601 8.27952755905512 193 22 76 0 62 254 492 300 Philodina roseola histone H2A variant H2Av1 copy 2d (H2Av1) gene, partial cds blastn 2103 235 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
14007162 14007162 PRJNA928559_P_NODE_61791_length_443_cov_8.229730_g60222_i0 PRJNA928559 61791 443 8.22973 36.4577039 Ploima 84394 Rotifera other_Eukaryota 283 1.4e-71   NTclustered gi|1859640894|gb|MN970216.1| 360698 g60222 i0 79.951 25.9887133182844 409 62 91 19 23 424 12520 12125 Proales similis mitochondrion, complete genome blastn 11513 283 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales similis
18753537 18753537 PRJNA928559_P_NODE_105415_length_347_cov_3.065693_g103846_i0 PRJNA928559 105415 347 3.065693 10.63795471 Proales similis 360698 Rotifera other_Eukaryota 73.1 2.52e-8   NTclustered gi|1859640894|gb|MN970216.1| 360698 g103846 i0 75.301 7.12103746397695 166 34 47 7 30 192 8375 8214 Proales similis mitochondrion, complete genome blastn 2471 73.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales similis
18755798 18755798 PRJNA928559_P_NODE_62495_length_441_cov_6.149457_g60926_i0 PRJNA928559 62495 441 6.149457 27.11910537 Asplanchna brightwellii 2005548 Rotifera other_Eukaryota 128 6.89e-25   NTclustered gi|2899343712|gb|PQ788833.1| 2005548 g60926 i0 95.062 0.55328798185941 81 4 18 0 11 91 3980 3900 Asplanchna brightwellii chromosome I mitochondrion, complete sequence blastn 244 128 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna brightwellii
20030968 20030968 PRJNA928559_P_NODE_71876_length_415_cov_9.777778_g70307_i0 PRJNA928559 71876 415 9.777778 40.5777787 Philodina citrina 468664 Rotifera other_Eukaryota 507 7.09e-139   NTclustered gi|407227484|emb|FR856884.1| 468664 g70307 i0 89.104 2.12771084337349 413 37 99 7 1 410 9260 9667 Philodina citrina complete mitochondrial genome blastn 883 507 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
23855165 23855165 PRJNA928559_P_NODE_170439_length_267_cov_4.891753_g168870_i0 PRJNA928559 170439 267 4.891753 13.06098051 Philodina sp. CWB-2005 338313 Rotifera other_Eukaryota 372 1.65e-98   NTclustered gi|71840346|gb|DQ078620.1| 338313 g168870 i0 91.76 99.6367041198502 267 22 100 0 1 267 182 448 Philodina sp. CWB-2005 clone Bear1.1 cytochrome oxidase subunit 1 (cox1) gene, partial cds; mitochondrial blastn 26603 372 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina sp. CWB-2005
23856359 23856359 PRJNA928559_P_NODE_46759_length_497_cov_5.683962_g45197_i0 PRJNA928559 46759 497 5.683962 28.24929114 Lepadella patella 231622 Rotifera other_Eukaryota 630 4.9e-176   NTclustered gi|83285192|gb|DQ297739.1| 231622 g45197 i0 92.188 67.010060362173 448 32 90 3 1 446 304 750 Lepadella patella 28S ribosomal RNA gene, partial sequence blastn 33304 630 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lepadellidae Lepadella Lepadella patella

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;