RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA928559" and tax_phylum = "Peploviricota"

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tax_superkingdom 1

tax_phylum 1

  • Peploviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA928559 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14929918 14929918 PRJNA928559_P_NODE_106992_length_345_cov_1.169118_g105423_i0 PRJNA928559 106992 345 1.169118 4.0334571 Simplexvirus macacinealpha1 3050305 Viruses Viruses 78.7 5.39e-10   NTclustered gi|2500377718|ref|NC_076165.1| 10325 g105423 i0 97.778 0.594202898550725 45 1 13 0 66 110 73086 73130 Macacine alphaherpesvirus 1 isolate KQ, complete genome blastn 205 78.7 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus macacinealpha1
16555476 16555476 PRJNA928559_P_NODE_215593_length_242_cov_0.905325_g214024_i0 PRJNA928559 215593 242 0.905325 2.1908865 Lymphocryptovirus 10375 Viruses Viruses 448 2.3799999999999995e-121   NTclustered gi|1862857967|emb|LR812925.1| 10376 g214024 i0 100 100 242 0 100 0 1 242 26565 26324 Human gammaherpesvirus 4 isolate eBL_CL-01 genome assembly, chromosome: EBV blastn 24200 448 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;