RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA928559" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA928559 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3455519 3455519 PRJNA928559_P_NODE_92903_length_369_cov_4.378378_g91334_i0 PRJNA928559 92903 369 4.378378 16.15621482 Lobosporangium transversale 64571 Fungi Fungi 206 2.54e-48   NTclustered gi|1227143098|ref|XM_022027954.1| 64571 g91334 i0 81.349 48.0785907859079 252 47 68 0 98 349 372 121 Lobosporangium transversale zinc-binding ribosomal protein (BCR41DRAFT_388020), partial mRNA blastn 17741 206 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
4732236 4732236 PRJNA928559_P_NODE_25784_length_635_cov_15.674377_g24277_i0 PRJNA928559 25784 635 15.674377 99.53229395 Lichtheimia corymbifera 42458 Fungi Fungi 185 5.96e-42   NTclustered gi|225131089|gb|FJ345350.1| 42458 g24277 i0 85.393 30.7669291338583 178 26 43 0 59 236 3387 3210 Mycocladus corymbiferus strain ATCC 14058 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 19537 185 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia corymbifera
6006683 6006683 PRJNA928559_P_NODE_208125_length_244_cov_2.748538_g206556_i0 PRJNA928559 208125 244 2.748538 6.70643272 Phycomyces blakesleeanus 4837 Fungi Fungi 130 9.88e-26   NTclustered gi|1069948066|ref|XM_018429500.1| 763407 g206556 i0 79.058 4.05737704918033 191 39 78 1 1 190 491 301 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 990 130 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
8554948 8554948 PRJNA928559_P_NODE_115387_length_332_cov_1.351351_g113818_i0 PRJNA928559 115387 332 1.351351 4.48648532 Calcarisporiella thermophila 911321 Fungi Fungi 231 3.74e-56   NTclustered gi|2837851210|ref|XM_069391808.1| 911321 g113818 i0 82.879 79.7018072289157 257 44 77 0 2 258 352 608 Calcarisporiella thermophila uncharacterized protein (VTP21DRAFT_1693), partial mRNA blastn 26461 231 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila
8906038 8906038 PRJNA928559_P_NODE_83507_length_388_cov_16.419048_g81938_i0 PRJNA928559 83507 388 16.419048 63.70590624 Eukaryota 2759 Fungi Fungi 128 5.99e-25   NTclustered gi|658131649|emb|HF968975.1| 4874 g81938 i0 86.441 27.4432989690722 118 14 30 2 273 388 1892 2009 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 3, clone BL2_4_2 blastn 10648 128 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
15280737 15280737 PRJNA928559_P_NODE_154892_length_282_cov_107.224880_g153323_i0 PRJNA928559 154892 282 107.22488 302.3741616 Opisthokonta 33154 Fungi Fungi 147 1.16e-30   NTclustered gi|411030762|gb|JX270228.1| 1253901 g153323 i0 88.095 78.1985815602837 126 12 44 3 127 250 110 234 Mortierella sp. 08CT03 28S-18S ribosomal RNA intergenic spacer, partial sequence blastn 22052 148 0.993243243243243 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Mortierella Mortierella sp. 08CT03
17480915 17480915 PRJNA928559_P_NODE_163074_length_274_cov_3.084577_g161505_i0 PRJNA928559 163074 274 3.084577 8.45174098 Lobosporangium transversale 64571 Fungi Fungi 119 2.45e-22   NTclustered gi|1227131896|ref|XM_022020593.1| 64571 g161505 i0 83.465 7.65328467153285 127 21 46 0 2 128 1 127 Lobosporangium transversale ribosomal L29e protein family-domain-containing protein (BCR41DRAFT_300791), partial mRNA blastn 2097 119 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
20030226 20030226 PRJNA928559_P_NODE_222536_length_229_cov_2.653846_g220967_i0 PRJNA928559 222536 229 2.653846 6.07730734 Gilbertella persicaria 101096 Fungi Fungi 193 1.15e-44   NTclustered gi|2323767062|ref|XM_051580778.1| 101096 g220967 i0 82.379 35.9563318777293 227 34 98 6 4 227 1781 1558 Gilbertella persicaria transitional endoplasmic reticulum ATPase (B0P05DRAFT_563993), mRNA blastn 8234 193 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria
25128521 25128521 PRJNA928559_P_NODE_14040_length_831_cov_49.905013_g12707_i0 PRJNA928559 14040 831 49.905013 414.71065803 uncultured Glomeromycotina 241622 Fungi Fungi 281 9.79e-71   NTclustered gi|219959662|gb|FJ567202.1| 241622 g12707 i0 82.421 41.6113116726835 347 37 42 15 1 345 678 354 Uncultured glomeromycete clone A2YM02RM1 large subunit ribosomal RNA gene, partial sequence blastn 34579 281 1 Eukaryota Opisthokonta Fungi Mucoromycota         uncultured Glomeromycotina

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;