RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA928559" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA928559 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8905955 8905955 PRJNA928559_P_NODE_54147_length_468_cov_56.108861_g52581_i0 PRJNA928559 54147 468 56.108861 262.58946948 Echinoidea 7625 Echinodermata other_Eukaryota 115 5.72e-21   NTclustered gi|2707351026|ref|XR_008586834.2| 7653 g52581 i0 82.09 24.0747863247863 134 24 29 0 49 182 3369 3502 PREDICTED: Lytechinus pictus large subunit ribosomal RNA (LOC129284211), rRNA blastn 11267 115 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
9831515 9831515 PRJNA928559_P_NODE_226228_length_209_cov_6.330882_g224659_i0 PRJNA928559 226228 209 6.330882 13.23154338 Ophiomyxa flaccida 331090 Echinodermata other_Eukaryota 156 1.36e-33   NTclustered gi|82623452|gb|DQ273711.1| 331090 g224659 i0 85.906 39.555023923445 149 18 70 3 13 159 152 5 Ophiomyxa flaccida 28S ribosomal RNA gene, partial sequence blastn 8267 156 1 Eukaryota Opisthokonta Metazoa Echinodermata Ophiuroidea Amphilepidida Ophiomyxidae Ophiomyxa Ophiomyxa flaccida

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;