RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA928559" and tax_phylum = "Candidatus Peregrinibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Peregrinibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA928559 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3455530 3455530 PRJNA928559_P_NODE_93463_length_368_cov_4.040678_g91894_i0 PRJNA928559 93463 368 4.040678 14.86969504 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 300 1.13e-76   NTclustered gi|2258833497|gb|CP060226.1| 2053688 g91894 i0 82.789 28.1358695652174 337 56 91 2 10 345 442662 442997 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome blastn 10354 300 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
21304071 21304071 PRJNA928559_P_NODE_111257_length_338_cov_2.083019_g109688_i0 PRJNA928559 111257 338 2.083019 7.04060422 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 121 8.619999999999999e-23   NTclustered gi|2258833497|gb|CP060226.1| 2053688 g109688 i0 73.476 0.970414201183432 328 83 96 4 2 327 605205 605530 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome blastn 328 121 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
23856128 23856128 PRJNA928559_P_NODE_29519_length_600_cov_223.703985_g27994_i0 PRJNA928559 29519 600 223.703985 1342.22391 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 721 0   NTclustered gi|2258833497|gb|CP060226.1| 2053688 g27994 i0 88.927 378.478333333333 587 61 98 4 6 590 814634 814050 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome blastn 227087 721 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;