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contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA928559" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 18 ✖

tax_clade 1

bioproject 1

  • PRJNA928559 · 18 ✖

analysis 1

  • blastn · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
902401 902401 PRJNA928559_P_NODE_134561_length_305_cov_8.474138_g132992_i0 PRJNA928559 134561 305 8.474138 25.8461209 Toxoplasma gondii 5811 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.008   NTclustered gi|820698945|tpe|LN714498.1| 432359 g132992 i0 100 0.095081967213114807 29 0 10 0 91 119 2293515 2293487 TPA_asm: Toxoplasma gondii VEG, chromosome chrVIII, complete genome blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
2177600 2177600 PRJNA928559_P_NODE_126882_length_315_cov_3.289256_g125313_i0 PRJNA928559 126882 315 3.289256 10.3611564 uncultured Eimeriidae 404735 SAR_Eukaryotes SAR_Eukaryotes 449 8.95e-122   NTclustered gi|134021988|gb|EF023338.1| 404735 g125313 i0 92.523 76.415873015873 321 12 100 8 1 315 1791 1477 Eimeriidae environmental sample clone Amb_18S_660 18S ribosomal RNA gene, partial sequence blastn 24071 449 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae   uncultured Eimeriidae
2177950 2177950 PRJNA928559_P_NODE_152442_length_285_cov_1.905660_g150873_i0 PRJNA928559 152442 285 1.90566 5.431131 Eimeria anguillae 947528 SAR_Eukaryotes SAR_Eukaryotes 104 7.17e-18   NTclustered gi|324022087|gb|GU593704.1| 947528 g150873 i0 84.112 8.89122807017544 107 17 38 0 140 246 1504 1610 Eimeria anguillae strain 128 28S ribosomal RNA gene, partial sequence blastn 2534 104 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria anguillae
2178754 2178754 PRJNA928559_P_NODE_206122_length_245_cov_1.720930_g204553_i0 PRJNA928559 206122 245 1.72093 4.2162785 Plasmodium cynomolgi 5827 SAR_Eukaryotes SAR_Eukaryotes 126 1.28e-24   NTclustered gi|457870372|ref|XM_004222059.1| 1120755 g204553 i0 84.328 4.6734693877551 134 15 53 6 94 224 592 462 Plasmodium cynomolgi strain B 40S ribosomal protein S11 (PCYB_083210) mRNA, complete cds blastn 1145 126 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium cynomolgi
4732161 4732161 PRJNA928559_P_NODE_22564_length_672_cov_4.215359_g21076_i0 PRJNA928559 22564 672 4.215359 28.32721248 Goussia bayae 2303416 SAR_Eukaryotes SAR_Eukaryotes 965 0   NTclustered gi|1450318675|gb|MH758782.1| 2303416 g21076 i0 92.522 97.1324404761905 682 38 100 12 1 672 1550 2228 Goussia bayae isolate Choptank large subunit ribosomal RNA gene, partial sequence blastn 65273 965 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Goussia Goussia bayae
5080978 5080978 PRJNA928559_P_NODE_117864_length_328_cov_1.929412_g116295_i0 PRJNA928559 117864 328 1.929412 6.32847136 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 161 4.91e-35   NTclustered gi|22035803|emb|AJ493200.1| 5807 g116295 i0 83.146 54.2225609756098 178 29 54 1 40 217 236 60 Cryptosporidium parvum 18S rRNA gene, isolate Th18Cp blastn 17785 161 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
9830672 9830672 PRJNA928559_P_NODE_16908_length_763_cov_3.781159_g15496_i0 PRJNA928559 16908 763 3.781159 28.85024317 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 126 4.449999999999999e-24   NTclustered gi|160358922|gb|EU252544.1| 88456 g15496 i0 89.216 11.3263433813893 102 10 13 1 12 113 42 142 Cyclospora cayetanensis 28S large subunit ribosomal RNA gene, partial sequence blastn 8642 126 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
9831001 9831001 PRJNA928559_P_NODE_191928_length_251_cov_1.674157_g190359_i0 PRJNA928559 191928 251 1.674157 4.20213407 Theileria equi 5872 SAR_Eukaryotes SAR_Eukaryotes 174 4.65e-39   NTclustered gi|2047401839|gb|MZ327271.1| 5872 g190359 i0 93.966 46.2151394422311 116 6 46 1 1 115 974 1089 Theileria equi voucher SD-53 small subunit ribosomal RNA gene, partial sequence blastn 11600 174 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria equi
10181589 10181589 PRJNA928559_P_NODE_199608_length_248_cov_0.891429_g198039_i0 PRJNA928559 199608 248 0.891429 2.21074392 Toxoplasma 5810 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|820700576|tpe|LN714500.1| 432359 g198039 i0 96.875 0.258064516129032 32 1 13 0 205 236 4345315 4345346 TPA_asm: Toxoplasma gondii VEG, chromosome chrX, complete genome blastn 64 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
11108078 11108078 PRJNA928559_P_NODE_81689_length_392_cov_4.031348_g80120_i0 PRJNA928559 81689 392 4.031348 15.80288416 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 128 6.05e-25   NTclustered gi|1673118587|ref|XM_029364694.1| 94643 g80120 i0 76.305 1.25510204081633 249 53 63 6 37 282 100 345 Besnoitia besnoiti ribosomal protein RPS20 (BESB_062800), partial mRNA blastn 492 128 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
15280808 15280808 PRJNA928559_P_NODE_174752_length_263_cov_12.115789_g173183_i0 PRJNA928559 174752 263 12.115789 31.86452507 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 62.1 3.99e-5   NTclustered gi|527046689|tpe|HG323591.1| 5807 g173183 i0 100 0.250950570342205 33 0 13 0 92 124 192 160 TPA: Cryptosporidium parvum SRP RNA for signal recognition particle RNA blastn 66 62.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
16206554 16206554 PRJNA928559_P_NODE_217553_length_238_cov_3.000000_g215984_i0 PRJNA928559 217553 238 3 7.14 Theileria uilenbergi 507731 SAR_Eukaryotes SAR_Eukaryotes 71.3 5.9e-8   NTclustered gi|396582134|gb|JN696674.1| 507731 g215984 i0 90.566 7.17226890756303 53 5 22 0 114 166 642 590 Theileria uilenbergi 28S ribosomal RNA gene, partial sequence blastn 1707 71.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria uilenbergi
16207015 16207015 PRJNA928559_P_NODE_44933_length_505_cov_176.314815_g43374_i0 PRJNA928559 44933 505 176.314815 890.38981575 Plasmodium falciparum 5833 SAR_Eukaryotes SAR_Eukaryotes 67.6 1.76e-6   NTclustered gi|1305413|gb|U48228.1|PFU48228 5833 g43374 i0 88.333 8.44158415841584 60 2 12 5 1 59 4100 4155 Plasmodium falciparum 5.8S ribosomal RNA gene, partial sequence, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 4263 67.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
17480758 17480758 PRJNA928559_P_NODE_153114_length_284_cov_3.137441_g151545_i0 PRJNA928559 153114 284 3.137441 8.91033244 Nephromyces sp. ex Molgula occidentalis 2544991 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.57e-4   NTclustered gi|1735073298|gb|MK573205.1| 2544991 g151545 i0 88.235 0.71830985915493 51 5 18 1 102 151 24881 24931 Nephromyces sp. ex Molgula occidentalis isolate 654 apicoplast, partial genome blastn 204 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Nephromyces Nephromyces sp. ex Molgula occidentalis
17481980 17481980 PRJNA928559_P_NODE_27434_length_619_cov_3.710623_g25919_i0 PRJNA928559 27434 619 3.710623 22.96875637 Coccidia sp. 2049902 SAR_Eukaryotes SAR_Eukaryotes 1026 0   NTclustered gi|1419337971|gb|MH590232.1| 2049902 g25919 i0 96.602 64.0420032310178 618 21 99 0 2 619 2822 2205 Coccidia sp. clone C2.5 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 39642 1026 1 Eukaryota Sar   Apicomplexa Conoidasida       Coccidia sp.
20030028 20030028 PRJNA928559_P_NODE_209016_length_244_cov_1.339181_g207447_i0 PRJNA928559 209016 244 1.339181 3.26760164 Plasmodium reichenowi 5854 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.022   NTclustered gi|1145263604|ref|XM_012910067.2| 5854 g207447 i0 100 0.114754098360656 28 0 11 0 179 206 4055 4082 Plasmodium reichenowi CH domain-containing protein, putative partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
21655094 21655094 PRJNA928559_P_NODE_171677_length_266_cov_2.948187_g170108_i0 PRJNA928559 171677 266 2.948187 7.84217742 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 292 1.32e-74   NTclustered gi|1027949875|ref|XM_734387.2| 31271 g170108 i0 86.923 77.3834586466165 260 34 98 0 1 260 1055 1314 Plasmodium chabaudi chabaudi alpha-tubulin 2, putative (PCHAS_0522900), partial mRNA blastn 20584 292 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
23856957 23856957 PRJNA928559_P_NODE_93419_length_368_cov_10.210169_g91850_i0 PRJNA928559 93419 368 10.210169 37.57342192 Plasmodium vinckei 5860 SAR_Eukaryotes SAR_Eukaryotes 60.2 2.09e-4   NTclustered gi|1931714359|ref|XR_552297.2| 54757 g91850 i0 86.792 3.17391304347826 53 7 14 0 253 305 4102 4050 Plasmodium vinckei vinckei ribosomal RNA (PVVCY_0502190), rRNA blastn 1168 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;