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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA928559" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA928559 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2178206 2178206 PRJNA928559_P_NODE_169162_length_269_cov_1.193878_g167593_i0 PRJNA928559 169162 269 1.193878 3.21153182 Hirudo verbana 311461 Annelida Annelida 63.9 1.14e-5   NTclustered gi|2918369621|emb|OZ237783.1| 311461 g167593 i0 100 9.50557620817844 34 0 13 0 236 269 2635944 2635911 Hirudo verbana genome assembly, chromosome: 5 blastn 2557 63.9 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
4732745 4732745 PRJNA928559_P_NODE_64604_length_435_cov_3.185083_g63035_i0 PRJNA928559 64604 435 3.185083 13.85511105 Helobdella robusta 6412 Annelida Annelida 723 0   NTclustered gi|675870283|ref|XM_009022454.1| 6412 g63035 i0 96.767 14.9402298850575 433 14 99 0 3 435 917 485 Helobdella robusta hypothetical protein partial mRNA blastn 6499 723 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
10181855 10181855 PRJNA928559_P_NODE_86208_length_383_cov_1.548387_g84639_i0 PRJNA928559 86208 383 1.548387 5.93032221 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 82.4 4.66e-11   NTclustered gi|38350384|gb|AY366513.1| 36124 g84639 i0 97.872 13.8616187989556 47 1 12 0 120 166 1467 1513 Ophelia rathkei 28S ribosomal RNA gene, partial sequence blastn 5309 82.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Opheliidae Ophelia Ophelia rathkei
22579384 22579384 PRJNA928559_P_NODE_124698_length_318_cov_3.114286_g123129_i0 PRJNA928559 124698 318 3.114286 9.90342948 Pristina aequiseta 212339 Annelida Annelida 414 3.2999999999999995e-111   NTclustered gi|285029437|gb|GQ355455.1| 212339 g123129 i0 90.312 94.0471698113208 320 25 100 5 1 318 320 635 Pristina aequiseta 28S ribosomal RNA gene, partial sequence blastn 29907 414 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Pristina Pristina aequiseta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;