contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA928559" and tax_kingdom = "Orthornavirae"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 904042 | 904042 | PRJNA928559_P_NODE_41_length_9217_cov_33.662620_g30_i0 | PRJNA928559 | 41 | 9217 | 33.66262 | 3102.6836854 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 17016 | 0 | NTclustered | gi|1884529248|gb|MT831364.1| | 2697049 | g30 | i0 | 99.989 | 100 | 9217 | 1 | 100 | 0 | 1 | 9217 | 20466 | 29682 | Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/WA-S2106/2020, complete genome | blastn | 921700 | 17016 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 2179339 | 2179339 | PRJNA928559_P_NODE_402_length_4247_cov_11.198610_g301_i0 | PRJNA928559 | 402 | 4247 | 11.19861 | 475.6049667 | Kummerowia striata picorna-like virus | 2739852 | Viruses | Viruses | 5941 | 0 | NTclustered | gi|1851269098|gb|MN832470.1| | 2739852 | g301 | i0 | 93.662 | 2.53590769955263 | 3976 | 246 | 94 | 5 | 274 | 4247 | 7789 | 3818 | Kummerowia striata picorna-like virus strain pt119-pic-7 genomic sequence, sequence | blastn | 10770 | 5941 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Kummerowia striata picorna-like virus | ||||
| 2179707 | 2179707 | PRJNA928559_P_NODE_70622_length_419_cov_1.511561_g69053_i0 | PRJNA928559 | 70622 | 419 | 1.511561 | 6.33344059 | Sopaded virus | 3131761 | Viruses | Viruses | 97.1 | 1.84e-15 | NTclustered | gi|2717323334|gb|PP174062.1| | 3131761 | g69053 | i0 | 78.947 | 4.00954653937947 | 152 | 24 | 35 | 8 | 28 | 175 | 482 | 335 | MAG: Sopaded virus isolate SP1C_k141_196651 genomic sequence | blastn | 1680 | 97.1 | 1 | Viruses | Orthornavirae | Lenarviricota | Leviviricetes | Sopaded virus | |||||
| 4731570 | 4731570 | PRJNA928559_P_NODE_185284_length_254_cov_10.353591_g183715_i0 | PRJNA928559 | 185284 | 254 | 10.353591 | 26.29812114 | Ripaglys virus | 3130696 | Viruses | Viruses | 196 | 1.01e-45 | NTclustered | gi|2717320496|gb|PP172998.1| | 3130696 | g183715 | i0 | 84.5 | 497.007874015748 | 200 | 30 | 79 | 1 | 31 | 230 | 2694 | 2496 | MAG: Ripaglys virus isolate KCAP2_k141_358354 genomic sequence | blastn | 126240 | 196 | 1 | Viruses | Orthornavirae | Lenarviricota | Leviviricetes | Ripaglys virus | |||||
| 8557369 | 8557369 | PRJNA928559_P_NODE_7_length_19459_cov_38.316569_g2_i0 | PRJNA928559 | 7 | 19459 | 38.316569 | 7456.02116171 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 35918 | 0 | NTclustered | gi|2054207027|emb|OU183464.1| | 2697049 | g2 | i0 | 99.985 | 100.005139010227 | 19460 | 2 | 100 | 1 | 1 | 19459 | 34 | 19493 | Severe acute respiratory syndrome coronavirus 2 isolate hCoV-19/Iceland/836/2020 genome assembly, chromosome: hCoV-19_Iceland_836_2020 | blastn | 1946000 | 35918 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 9830104 | 9830104 | PRJNA928559_P_NODE_132168_length_308_cov_14.906383_g130599_i0 | PRJNA928559 | 132168 | 308 | 14.906383 | 45.91165964 | Chrocagost virus | 3129398 | Viruses | Viruses | 311 | 4.3e-80 | NTclustered | gi|2717317482|gb|PP171846.1| | 3129398 | g130599 | i0 | 85.522 | 294.142857142857 | 297 | 43 | 96 | 0 | 1 | 297 | 5566 | 5862 | MAG: Chrocagost virus isolate CC1A_k141_84256 genomic sequence | blastn | 90596 | 311 | 1 | Viruses | Orthornavirae | Lenarviricota | Amabiliviricetes | Chrocagost virus | |||||
| 11107080 | 11107080 | PRJNA928559_P_NODE_211989_length_243_cov_0.917647_g210420_i0 | PRJNA928559 | 211989 | 243 | 0.917647 | 2.22988221 | Ripaglys virus | 3130696 | Viruses | Viruses | 261 | 3.34e-65 | NTclustered | gi|2717320496|gb|PP172998.1| | 3130696 | g210420 | i0 | 86.307 | 240.584362139918 | 241 | 31 | 99 | 2 | 1 | 240 | 171 | 410 | MAG: Ripaglys virus isolate KCAP2_k141_358354 genomic sequence | blastn | 58462 | 261 | 1 | Viruses | Orthornavirae | Lenarviricota | Leviviricetes | Ripaglys virus | |||||
| 11107918 | 11107918 | PRJNA928559_P_NODE_69489_length_422_cov_1.762178_g67920_i0 | PRJNA928559 | 69489 | 422 | 1.762178 | 7.43639116 | Chrocagost virus | 3129398 | Viruses | Viruses | 483 | 1.22e-131 | NTclustered | gi|2717317482|gb|PP171846.1| | 3129398 | g67920 | i0 | 87.952 | 478.682464454976 | 415 | 43 | 97 | 7 | 1 | 411 | 5451 | 5862 | MAG: Chrocagost virus isolate CC1A_k141_84256 genomic sequence | blastn | 202004 | 483 | 1 | Viruses | Orthornavirae | Lenarviricota | Amabiliviricetes | Chrocagost virus | |||||
| 11108236 | 11108236 | PRJNA928559_P_NODE_93789_length_368_cov_1.579661_g92220_i0 | PRJNA928559 | 93789 | 368 | 1.579661 | 5.81315248 | Ripaglys virus | 3130696 | Viruses | Viruses | 250 | 1.15e-61 | NTclustered | gi|2717320496|gb|PP172998.1| | 3130696 | g92220 | i0 | 86.996 | 40.0788043478261 | 223 | 27 | 60 | 2 | 129 | 350 | 952 | 1173 | MAG: Ripaglys virus isolate KCAP2_k141_358354 genomic sequence | blastn | 14749 | 250 | 1 | Viruses | Orthornavirae | Lenarviricota | Leviviricetes | Ripaglys virus | |||||
| 12381092 | 12381092 | PRJNA928559_P_NODE_10150_length_963_cov_13.192135_g8951_i0 | PRJNA928559 | 10150 | 963 | 13.192135 | 127.04026005 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 1755 | 0 | NTclustered | gi|2125806870|gb|OK670657.1| | 2697049 | g8951 | i0 | 100 | 98.5597092419522 | 950 | 0 | 99 | 0 | 14 | 963 | 20448 | 19499 | Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/USA/MN-MDH-14344/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), and membrane glycoprotein (M) genes, complete cds; ORF6 gene, complete sequence; ORF7a protein (ORF7a) and ORF7b (ORF7b) genes, complete cds; ORF8 gene, complete sequence; and nucleocapsid phosphoprotein (N) and ORF10 protein (ORF10) genes, complete cds | blastn | 94913 | 1755 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 14932226 | 14932226 | PRJNA928559_P_NODE_632_length_3457_cov_11.764775_g482_i0 | PRJNA928559 | 632 | 3457 | 11.764775 | 406.70827175 | Kummerowia striata picorna-like virus | 2739852 | Viruses | Viruses | 4723 | 0 | NTclustered | gi|1851269098|gb|MN832470.1| | 2739852 | g482 | i0 | 91.502 | 1.3153022852184 | 3436 | 286 | 99 | 6 | 26 | 3457 | 1 | 3434 | Kummerowia striata picorna-like virus strain pt119-pic-7 genomic sequence, sequence | blastn | 4547 | 4723 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Kummerowia striata picorna-like virus | ||||
| 16205737 | 16205737 | PRJNA928559_P_NODE_160893_length_276_cov_5.014778_g159324_i0 | PRJNA928559 | 160893 | 276 | 5.014778 | 13.84078728 | Sopazov virus | 3131687 | Viruses | Viruses | 313 | 1.05e-80 | NTclustered | gi|2717323152|gb|PP173988.1| | 3131687 | g159324 | i0 | 87.546 | 40.018115942029 | 273 | 31 | 98 | 3 | 1 | 271 | 53 | 324 | MAG: Sopazov virus isolate SP1B_k141_222276 genomic sequence | blastn | 11045 | 313 | 1 | Viruses | Orthornavirae | Lenarviricota | Leviviricetes | Sopazov virus | |||||
| 16206427 | 16206427 | PRJNA928559_P_NODE_206913_length_245_cov_0.906977_g205344_i0 | PRJNA928559 | 206913 | 245 | 0.906977 | 2.22209365 | Chrocurosk virus | 3129322 | Viruses | Viruses | 274 | 4.34e-69 | NTclustered | gi|2717317280|gb|PP171770.1| | 3129322 | g205344 | i0 | 87.712 | 227.959183673469 | 236 | 27 | 96 | 2 | 5 | 239 | 1662 | 1896 | MAG: Chrocurosk virus isolate CC1A_k141_129357 genomic sequence | blastn | 55850 | 274 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Totiviridae | Chrocurosk virus | |||
| 18756115 | 18756115 | PRJNA928559_P_NODE_88755_length_377_cov_6.108553_g87186_i0 | PRJNA928559 | 88755 | 377 | 6.108553 | 23.02924481 | Chrocaferb virus | 3129387 | Viruses | Viruses | 316 | 1.15e-81 | NTclustered | gi|2717317453|gb|PP171835.1| | 3129387 | g87186 | i0 | 82.4 | 13.0238726790451 | 375 | 54 | 98 | 11 | 1 | 369 | 68 | 436 | MAG: Chrocaferb virus isolate CC1A_k141_77359 genomic sequence | blastn | 4910 | 316 | 1 | Viruses | Orthornavirae | Lenarviricota | Amabiliviricetes | Chrocaferb virus | |||||
| 20030172 | 20030172 | PRJNA928559_P_NODE_218976_length_235_cov_14.888889_g217407_i0 | PRJNA928559 | 218976 | 235 | 14.888889 | 34.98888915 | Ripaglys virus | 3130696 | Viruses | Viruses | 213 | 9.13e-51 | NTclustered | gi|2717320496|gb|PP172998.1| | 3130696 | g217407 | i0 | 86 | 408.340425531915 | 200 | 27 | 85 | 1 | 31 | 230 | 2694 | 2496 | MAG: Ripaglys virus isolate KCAP2_k141_358354 genomic sequence | blastn | 95960 | 213 | 1 | Viruses | Orthornavirae | Lenarviricota | Leviviricetes | Ripaglys virus | |||||
| 22580751 | 22580751 | PRJNA928559_P_NODE_220038_length_233_cov_5.725000_g218469_i0 | PRJNA928559 | 220038 | 233 | 5.725 | 13.33925 | Sopidub virus | 3131684 | Viruses | Viruses | 180 | 9.169999999999999e-41 | NTclustered | gi|2717323145|gb|PP173985.1| | 3131684 | g218469 | i0 | 91.538 | 24.6351931330472 | 130 | 11 | 56 | 0 | 104 | 233 | 2130 | 2259 | MAG: Sopidub virus isolate SP1B_k141_213983 genomic sequence | blastn | 5740 | 180 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Picobirnaviridae | Sopidub virus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;