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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA928559" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 15 ✖

tax_clade 1

bioproject 1

  • PRJNA928559 · 15 ✖

analysis 1

  • blastn · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
904012 904012 PRJNA928559_P_NODE_39441_length_532_cov_5347.211329_g37886_i0 PRJNA928559 39441 532 5347.211329 28447.16427028 uncultured Methanoregula sp. 1005933 Archaea Archaea 730 0   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g37886 i0 93.227 284.716165413534 502 25 94 9 1 498 3114894 3114398 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 151469 730 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
1253224 1253224 PRJNA928559_P_NODE_88381_length_378_cov_2.704918_g86812_i0 PRJNA928559 88381 378 2.704918 10.22459004 Archaea 2157 Archaea Archaea 237 9.26e-58   NTclustered gi|663518477|gb|KF900844.1| 1456434 g86812 i0 78.249 32.1058201058201 377 76 99 4 1 374 1955 2328 Uncultured marine group II/III euryarchaeote KM3_33_C12 genomic sequence blastn 12136 237 1 Archaea   Methanobacteriati Methanobacteriota         uncultured marine group II/III euryarchaeote KM3_33_C12
2178414 2178414 PRJNA928559_P_NODE_183162_length_256_cov_2.513661_g181593_i0 PRJNA928559 183162 256 2.513661 6.43497216 uncultured Methanoregula sp. 1005933 Archaea Archaea 390 4.3399999999999997e-104   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g181593 i0 94.141 112.66796875 256 15 100 0 1 256 3089861 3090116 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 28843 390 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
2528566 2528566 PRJNA928559_P_NODE_188402_length_253_cov_0.866667_g186833_i0 PRJNA928559 188402 253 0.866667 2.19266751 root 1 Root_unresolved Root_unresolved 52.8 0.023   NTclustered gi|2224381021|gb|CP095390.1| 1419050 g186833 i0 100 0.553359683794466 28 0 11 0 75 102 1418096 1418123 Natribaculum breve strain TRM20010 chromosome, complete genome blastn 140 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natribaculum Natribaculum breve
4732477 4732477 PRJNA928559_P_NODE_42584_length_516_cov_21317.155756_g41026_i0 PRJNA928559 42584 516 21317.155756 109996.52370096 uncultured Methanoregula sp. 1005933 Archaea Archaea 937 0   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g41026 i0 99.419 309.87015503876 516 3 100 0 1 516 3117554 3117039 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 159893 937 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
7282277 7282277 PRJNA928559_P_NODE_5946_length_1222_cov_4.832898_g5046_i0 PRJNA928559 5946 1222 4.832898 59.05801356 uncultured Methanoregula sp. 1005933 Archaea Archaea 1194 0   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g5046 i0 84.653 44.6039279869067 1238 147 99 22 1 1210 3123961 3122739 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 54506 1194 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
8557434 8557434 PRJNA928559_P_NODE_847_length_2992_cov_14.116136_g662_i0 PRJNA928559 847 2992 14.116136 422.35478912 Candidatus Methanomethylophilaceae archaeon 2517205 Archaea Archaea 147 1.39e-29   NTclustered gi|2621784586|emb|OY781044.1| 2517205 g662 i0 73.026 9.72359625668449 456 108 15 13 842 1291 992472 992026 MAG: Candidatus Methanomethylophilaceae archaeon isolate 11c15bc4-9f39-4069-9170-00aaf79b19ed genome assembly, chromosome: 1 blastn 29093 147 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomethylophilaceae   Candidatus Methanomethylophilaceae archaeon
9831104 9831104 PRJNA928559_P_NODE_199888_length_248_cov_0.891429_g198319_i0 PRJNA928559 199888 248 0.891429 2.21074392 Methanothrix soehngenii 2223 Archaea Archaea 381 2.519999999999999e-101   NTclustered gi|328927127|gb|CP002565.1| 990316 g198319 i0 100 45.6693548387097 206 0 100 0 43 248 838476 838271 Methanosaeta concilii GP-6, complete genome blastn 11326 381 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
16205961 16205961 PRJNA928559_P_NODE_175593_length_263_cov_1.415789_g174024_i0 PRJNA928559 175593 263 1.415789 3.72352507 Halorubrum sp. 2020YC2 2836432 Archaea Archaea 52.8 0.024   NTclustered gi|2047351610|gb|CP076019.1| 2836432 g174024 i0 100 0.106463878326996 28 0 11 0 32 59 1404453 1404426 Halorubrum sp. 2020YC2 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum sp. 2020YC2
19104054 19104054 PRJNA928559_P_NODE_10695_length_940_cov_7.726644_g9471_i0 PRJNA928559 10695 940 7.726644 72.6304536 Archaea 2157 Archaea Archaea 163 4.21e-35   NTclustered gi|314912325|gb|HQ692040.1| 114243 g9471 i0 75.532 38.718085106383 376 68 38 18 153 512 1287 920 Uncultured euryarchaeote clone ClipA 5 16S ribosomal RNA gene, partial sequence blastn 36395 163 1 Archaea   Methanobacteriati Methanobacteriota         uncultured euryarchaeote
23855492 23855492 PRJNA928559_P_NODE_192679_length_251_cov_0.876404_g191110_i0 PRJNA928559 192679 251 0.876404 2.19977404 Halosimplex aquaticum 3026162 Archaea Archaea 52.8 0.023   NTclustered gi|2446562038|gb|CP118158.1| 3026162 g191110 i0 96.774 0.123505976095618 31 1 12 0 189 219 1866552 1866582 Halosimplex aquaticum strain XZYJT29 chromosome, complete genome blastn 31 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halosimplex Halosimplex aquaticum
25129264 25129264 PRJNA928559_P_NODE_18760_length_729_cov_2.637195_g17313_i0 PRJNA928559 18760 729 2.637195 19.22515155 uncultured marine group II/III euryarchaeote KM3_203_F09 1456423 Archaea Archaea 398 8.139999999999997e-106   NTclustered gi|663517090|gb|KF900805.1| 1456423 g17313 i0 86.179 93.4389574759945 369 49 50 2 57 424 11179 10812 Uncultured marine group II/III euryarchaeote KM3_203_F09 genomic sequence blastn 68117 398 1 Archaea   Methanobacteriati Methanobacteriota         uncultured marine group II/III euryarchaeote KM3_203_F09
25130275 25130275 PRJNA928559_P_NODE_52280_length_475_cov_9.927861_g50714_i0 PRJNA928559 52280 475 9.927861 47.15733975 uncultured Methanoregula sp. 1005933 Archaea Archaea 717 0   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g50714 i0 94.433 91.2168421052632 467 25 98 1 9 474 3123729 3124195 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 43328 717 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
25479276 25479276 PRJNA928559_P_NODE_136400_length_303_cov_2.443478_g134831_i0 PRJNA928559 136400 303 2.443478 7.40373834 Archaea 2157 Archaea Archaea 161 4.49e-35   NTclustered gi|663527907|gb|KF901100.1| 1456516 g134831 i0 82.292 35 192 28 62 6 13 201 24684 24496 Uncultured marine group II/III euryarchaeote KM3_80_H04 genomic sequence blastn 10605 161 1 Archaea   Methanobacteriati Methanobacteriota         uncultured marine group II/III euryarchaeote KM3_80_H04
25479515 25479515 PRJNA928559_P_NODE_204900_length_246_cov_0.901734_g203331_i0 PRJNA928559 204900 246 0.901734 2.21826564 Halobacteriales 2235 Archaea Archaea 449 6.74e-122   NTclustered gi|1675275423|gb|MN000441.1| 2243 g203331 i0 99.593 100 246 1 100 0 1 246 678 433 Halobacterium sp. strain PTA096 16S ribosomal RNA gene, partial sequence blastn 24600 449 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;