contig_metadata
20 rows where analysis = "blastn", bioproject = "PRJNA928559" and tax_clade = "delta/epsilon subdivisions"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2177517 | 2177517 | PRJNA928559_P_NODE_120162_length_325_cov_1.238095_g118593_i0 | PRJNA928559 | 120162 | 325 | 1.238095 | 4.02380875 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 315 | 3.5299999999999993e-81 | NTclustered | gi|2874253999|emb|OY970324.1| | 34034 | g118593 | i0 | 84.639 | 136.750769230769 | 319 | 46 | 98 | 3 | 9 | 325 | 82677 | 82360 | MAG: uncultured delta proteobacterium isolate MFD05502.bin.1.132 genome assembly, chromosome: 1 | blastn | 44444 | 315 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 5081497 | 5081497 | PRJNA928559_P_NODE_68804_length_423_cov_139764.431429_g67235_i0 | PRJNA928559 | 68804 | 423 | 139764.431429 | 591203.54494467 | Pseudomonadota | 1224 | Bacteria | Bacteria | 398 | 4.539999999999998e-106 | NTclustered | gi|202950689|emb|FM206054.1| | 34034 | g67235 | i0 | 100 | 52.9929078014184 | 215 | 0 | 51 | 0 | 209 | 423 | 230 | 16 | Uncultured delta proteobacterium partial 16S rRNA gene, clone GW_1 | blastn | 22416 | 398 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 6357276 | 6357276 | PRJNA928559_P_NODE_94985_length_365_cov_98461.352740_g93416_i0 | PRJNA928559 | 94985 | 365 | 98461.35274 | 359383.937501 | Pseudomonadota | 1224 | Bacteria | Bacteria | 399 | 1.07e-106 | NTclustered | gi|202950689|emb|FM206054.1| | 34034 | g93416 | i0 | 100 | 60.3616438356164 | 216 | 0 | 59 | 0 | 150 | 365 | 231 | 16 | Uncultured delta proteobacterium partial 16S rRNA gene, clone GW_1 | blastn | 22032 | 399 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 7281059 | 7281059 | PRJNA928559_P_NODE_178666_length_260_cov_1.860963_g177097_i0 | PRJNA928559 | 178666 | 260 | 1.860963 | 4.8385038 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 307 | 4.58e-79 | NTclustered | gi|2874253674|emb|OY969108.1| | 34034 | g177097 | i0 | 88.327 | 249.25 | 257 | 29 | 98 | 1 | 2 | 257 | 1544115 | 1543859 | MAG: uncultured delta proteobacterium isolate MFD01828.bin.c.1 genome assembly, chromosome: 1 | blastn | 64805 | 307 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 7631285 | 7631285 | PRJNA928559_P_NODE_68806_length_423_cov_75028.211429_g67237_i0 | PRJNA928559 | 68806 | 423 | 75028.211429 | 317369.33434467 | Pseudomonadota | 1224 | Bacteria | Bacteria | 385 | 3.54e-102 | NTclustered | gi|202950689|emb|FM206054.1| | 34034 | g67237 | i0 | 100 | 50.6808510638298 | 208 | 0 | 49 | 0 | 1 | 208 | 16 | 223 | Uncultured delta proteobacterium partial 16S rRNA gene, clone GW_1 | blastn | 21438 | 385 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 8905802 | 8905802 | PRJNA928559_P_NODE_218447_length_236_cov_234.981595_g216878_i0 | PRJNA928559 | 218447 | 236 | 234.981595 | 554.5565642 | Bacteria | 2 | Bacteria | Bacteria | 69.4 | 2.1e-7 | NTclustered | gi|407911330|gb|JQ772010.1| | 34034 | g216878 | i0 | 100 | 14.6228813559322 | 37 | 0 | 16 | 0 | 2 | 38 | 663 | 627 | Uncultured delta proteobacterium clone CS54 16S ribosomal RNA gene, partial sequence | blastn | 3451 | 69.4 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 10181823 | 10181823 | PRJNA928559_P_NODE_75148_length_407_cov_108226.101796_g73579_i0 | PRJNA928559 | 75148 | 407 | 108226.101796 | 440480.23430972 | Pseudomonadota | 1224 | Bacteria | Bacteria | 335 | 3.459999999999999e-87 | NTclustered | gi|202950689|emb|FM206054.1| | 34034 | g73579 | i0 | 100 | 50.2506142506142 | 181 | 0 | 44 | 0 | 227 | 407 | 7 | 187 | Uncultured delta proteobacterium partial 16S rRNA gene, clone GW_1 | blastn | 20452 | 335 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 11456470 | 11456470 | PRJNA928559_P_NODE_137829_length_301_cov_46.885965_g136260_i0 | PRJNA928559 | 137829 | 301 | 46.885965 | 141.12675465 | Bacteria | 2 | Bacteria | Bacteria | 484 | 2.3299999999999996e-132 | NTclustered | gi|315177282|gb|HQ532522.1| | 34034 | g136260 | i0 | 95.681 | 104.654485049834 | 301 | 13 | 100 | 0 | 1 | 301 | 470 | 170 | Uncultured delta proteobacterium clone CR011E8 16S ribosomal RNA gene, partial sequence | blastn | 31501 | 484 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 12382181 | 12382181 | PRJNA928559_P_NODE_179870_length_259_cov_1.784946_g178301_i0 | PRJNA928559 | 179870 | 259 | 1.784946 | 4.62301014 | Bradymonas sediminis | 1548548 | Bacteria | Bacteria | 89.8 | 1.8e-13 | NTclustered | gi|1406952946|gb|CP030032.1| | 1548548 | g178301 | i0 | 87.179 | 0.301158301158301 | 78 | 10 | 30 | 0 | 172 | 249 | 167761 | 167684 | Bradymonas sediminis strain FA350 chromosome, complete genome | blastn | 78 | 89.8 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Bradymonas | Bradymonas sediminis | |||
| 12732254 | 12732254 | PRJNA928559_P_NODE_172650_length_265_cov_3.958333_g171081_i0 | PRJNA928559 | 172650 | 265 | 3.958333 | 10.48958245 | Bacteria | 2 | Bacteria | Bacteria | 411 | 3.47e-110 | NTclustered | gi|523452747|gb|KF183167.1| | 34034 | g171081 | i0 | 95.686 | 89.3433962264151 | 255 | 11 | 96 | 0 | 1 | 255 | 255 | 1 | Uncultured delta proteobacterium clone S3-039 16S ribosomal RNA gene, partial sequence | blastn | 23676 | 411 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 12732530 | 12732530 | PRJNA928559_P_NODE_52790_length_473_cov_7.902500_g51224_i0 | PRJNA928559 | 52790 | 473 | 7.9025 | 37.378825 | Bacteria | 2 | Bacteria | Bacteria | 65.8 | 5.91e-6 | NTclustered | gi|618731234|emb|HE803860.1| | 34034 | g51224 | i0 | 91.489 | 0.198731501057082 | 47 | 4 | 10 | 0 | 221 | 267 | 1346 | 1300 | Uncultured delta proteobacterium partial 16S rRNA gene, isolate 1.2, clone 2 | blastn | 94 | 65.8 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 16555159 | 16555159 | PRJNA928559_P_NODE_129513_length_312_cov_1.644351_g127944_i0 | PRJNA928559 | 129513 | 312 | 1.644351 | 5.13037512 | root | 1 | Root_unresolved | Root_unresolved | 111 | 4.74e-20 | NTclustered | gi|18077335|emb|AJ347755.1| | 34034 | g127944 | i0 | 90.588 | 27.2532051282051 | 85 | 7 | 27 | 1 | 199 | 283 | 1152 | 1069 | Uncultured delta proteobacterium 16S rRNA gene, clone ST-12K6 | blastn | 8503 | 111 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 17482914 | 17482914 | PRJNA928559_P_NODE_9954_length_971_cov_5.164811_g8765_i0 | PRJNA928559 | 9954 | 971 | 5.164811 | 50.15031481 | uncultured delta proteobacterium DeepAnt-1F12 | 357894 | Bacteria | Bacteria | 946 | 0 | NTclustered | gi|82617822|gb|DQ267495.1| | 357894 | g8765 | i0 | 84.67 | 187.880535530381 | 985 | 112 | 99 | 24 | 1 | 961 | 3929 | 2960 | Uncultured delta proteobacterium DeepAnt-1F12 fosmid, complete sequence | blastn | 182432 | 946 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium DeepAnt-1F12 | ||||||
| 17830270 | 17830270 | PRJNA928559_P_NODE_152974_length_284_cov_85405.753555_g151405_i0 | PRJNA928559 | 152974 | 284 | 85405.753555 | 242552.3400962 | Pseudomonadota | 1224 | Bacteria | Bacteria | 305 | 1.82e-78 | NTclustered | gi|202950689|emb|FM206054.1| | 34034 | g151405 | i0 | 100 | 58.1021126760563 | 165 | 0 | 58 | 0 | 120 | 284 | 180 | 16 | Uncultured delta proteobacterium partial 16S rRNA gene, clone GW_1 | blastn | 16501 | 307 | 0.993485342019544 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 18756059 | 18756059 | PRJNA928559_P_NODE_83995_length_387_cov_5.063694_g82426_i0 | PRJNA928559 | 83995 | 387 | 5.063694 | 19.59649578 | uncultured delta proteobacterium DeepAnt-1F12 | 357894 | Bacteria | Bacteria | 394 | 5.33e-105 | NTclustered | gi|82617822|gb|DQ267495.1| | 357894 | g82426 | i0 | 85.176 | 138.498708010336 | 398 | 43 | 99 | 9 | 1 | 384 | 4183 | 4578 | Uncultured delta proteobacterium DeepAnt-1F12 fosmid, complete sequence | blastn | 53599 | 394 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium DeepAnt-1F12 | ||||||
| 20379294 | 20379294 | PRJNA928559_P_NODE_210256_length_244_cov_0.912281_g208687_i0 | PRJNA928559 | 210256 | 244 | 0.912281 | 2.22596564 | Thermodesulfobacteriota | 200940 | Bacteria | Bacteria | 446 | 8.639999999999999e-121 | NTclustered | gi|68161332|gb|DQ069214.1| | 34034 | g208687 | i0 | 99.59 | 99.983606557377 | 244 | 1 | 100 | 0 | 1 | 244 | 871 | 628 | Uncultured delta proteobacterium clone MAB1 16S ribosomal RNA gene, partial sequence | blastn | 24396 | 446 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 21304970 | 21304970 | PRJNA928559_P_NODE_173197_length_265_cov_1.625000_g171628_i0 | PRJNA928559 | 173197 | 265 | 1.625 | 4.30625 | Bradymonas sediminis | 1548548 | Bacteria | Bacteria | 135 | 2.3400000000000003e-27 | NTclustered | gi|1406952946|gb|CP030032.1| | 1548548 | g171628 | i0 | 78.774 | 0.8 | 212 | 37 | 78 | 8 | 13 | 220 | 3664427 | 3664220 | Bradymonas sediminis strain FA350 chromosome, complete genome | blastn | 212 | 135 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Bradymonas | Bradymonas sediminis | |||
| 21305516 | 21305516 | PRJNA928559_P_NODE_210857_length_243_cov_2.305882_g209288_i0 | PRJNA928559 | 210857 | 243 | 2.305882 | 5.60329326 | uncultured delta proteobacterium DeepAnt-1F12 | 357894 | Bacteria | Bacteria | 303 | 5.48e-78 | NTclustered | gi|82617822|gb|DQ267495.1| | 357894 | g209288 | i0 | 92.453 | 145.279835390946 | 212 | 16 | 87 | 0 | 31 | 242 | 4225 | 4014 | Uncultured delta proteobacterium DeepAnt-1F12 fosmid, complete sequence | blastn | 35303 | 303 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium DeepAnt-1F12 | ||||||
| 22930517 | 22930517 | PRJNA928559_P_NODE_149998_length_287_cov_101368.130841_g148429_i0 | PRJNA928559 | 149998 | 287 | 101368.130841 | 290926.53551367 | Pseudomonadota | 1224 | Bacteria | Bacteria | 329 | 1.09e-85 | NTclustered | gi|202950689|emb|FM206054.1| | 34034 | g148429 | i0 | 100 | 62.0209059233449 | 178 | 0 | 62 | 0 | 1 | 178 | 16 | 193 | Uncultured delta proteobacterium partial 16S rRNA gene, clone GW_1 | blastn | 17800 | 329 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 24204208 | 24204208 | PRJNA928559_P_NODE_126779_length_315_cov_105289.454545_g125210_i0 | PRJNA928559 | 126779 | 315 | 105289.454545 | 331661.78181675 | Pseudomonadota | 1224 | Bacteria | Bacteria | 366 | 9.27e-97 | NTclustered | gi|202950689|emb|FM206054.1| | 34034 | g125210 | i0 | 100 | 64.1142857142857 | 198 | 0 | 63 | 0 | 118 | 315 | 213 | 16 | Uncultured delta proteobacterium partial 16S rRNA gene, clone GW_1 | blastn | 20196 | 366 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;