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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA928559" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 7 ✖

bioproject 1

  • PRJNA928559 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3454323 3454323 PRJNA928559_P_NODE_210503_length_243_cov_8.400000_g208934_i0 PRJNA928559 210503 243 8.4 20.412 Singekia franciliensis 2925418 Root_unresolved Root_unresolved 255 1.5600000000000001e-63   NTclustered gi|2206682165|gb|OM966638.1| 2925418 g208934 i0 85.83 1.01646090534979 247 27 100 7 1 243 7011 6769 Singekia franciliensis strain ORSAYFEB19APU1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 247 255 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Singekia Singekia franciliensis
7281430 7281430 PRJNA928559_P_NODE_204466_length_246_cov_0.901734_g202897_i0 PRJNA928559 204466 246 0.901734 2.21826564 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 455 1.4500000000000002e-123   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g202897 i0 100 6.3130081300813 246 0 100 0 1 246 5175 4930 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1553 455 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis
14931153 14931153 PRJNA928559_P_NODE_192252_length_251_cov_1.314607_g190683_i0 PRJNA928559 192252 251 1.314607 3.29966357 Thecamonas trahens 529818 Root_unresolved Root_unresolved 58.4 4.89e-4   NTclustered gi|923132932|ref|XM_013904478.1| 461836 g190683 i0 100 1.22310756972112 31 0 12 0 114 144 586 616 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_03586), mRNA blastn 307 58.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
14932091 14932091 PRJNA928559_P_NODE_51792_length_477_cov_3.603960_g50226_i0 PRJNA928559 51792 477 3.60396 17.1908892 Thecamonas trahens 529818 Root_unresolved Root_unresolved 145 7.449999999999998e-30   NTclustered gi|761380055|ref|NC_026452.1| 529818 g50226 i0 78.189 39.4444444444444 243 41 50 12 234 472 372 606 Thecamonas trahens strain ATCC 50062 mitochondrion, complete genome blastn 18815 145 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
16205291 16205291 PRJNA928559_P_NODE_13093_length_858_cov_5.615287_g11790_i0 PRJNA928559 13093 858 5.615287 48.17916246 Singekia franciliensis 2925418 Root_unresolved Root_unresolved 1297 0   NTclustered gi|2206682165|gb|OM966638.1| 2925418 g11790 i0 93.953 70.488344988345 860 49 100 3 1 858 5784 4926 Singekia franciliensis strain ORSAYFEB19APU1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 60479 1297 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Singekia Singekia franciliensis
23854225 23854225 PRJNA928559_P_NODE_10359_length_954_cov_13.945516_g9149_i0 PRJNA928559 10359 954 13.945516 133.04022264 Singekia franciliensis 2925418 Root_unresolved Root_unresolved 1321 0   NTclustered gi|2206682165|gb|OM966638.1| 2925418 g9149 i0 91.796 44.685534591195 963 57 99 20 3 954 3473 4424 Singekia franciliensis strain ORSAYFEB19APU1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 42630 1321 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Singekia Singekia franciliensis
24204505 24204505 PRJNA928559_P_NODE_210499_length_243_cov_9.364706_g208930_i0 PRJNA928559 210499 243 9.364706 22.75623558 Singekia 3031157 Root_unresolved Root_unresolved 263 9.3e-66   NTclustered gi|2206682174|gb|OM966647.1| 2925341 g208930 i0 94.706 51.6584362139918 170 7 69 2 3 170 1987 2156 Singekia montserratensis strain MONTSE19P8 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12553 265 0.992452830188679 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Singekia Singekia montserratensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;