RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA927284" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA927284 · 18 ✖

analysis 1

  • blastn · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2528258 2528258 PRJNA927284_P_NODE_7742_length_179_cov_1.513333_g7535_i0 PRJNA927284 7742 179 1.513333 2.70886607 Opisthokonta 33154 Fungi Fungi 331 1.74e-86   NTclustered gi|325484983|gb|HQ407432.1| 5061 g7535 i0 100 47.3463687150838 179 0 100 0 1 179 399 577 Aspergillus niger strain B1.Eg mitochondrial citrate synthase precursor, gene, partial cds; nuclear gene for mitochondrial product blastn 8475 331 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus niger
3452735 3452735 PRJNA927284_P_NODE_343_length_1367_cov_3.281016_g277_i0 PRJNA927284 343 1367 3.281016 44.85148872 Penicillium citrinum 5077 Fungi Fungi 60.2 8.37e-4   NTclustered gi|2513254669|ref|XM_056645251.1| 5077 g277 i0 94.737 0.0512070226773958 38 2 3 0 126 163 731 694 Penicillium citrinum uncharacterized protein (N7469_006333), partial mRNA blastn 70 60.2 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium citrinum
6356611 6356611 PRJNA927284_P_NODE_8765_length_160_cov_9.893130_g8558_i0 PRJNA927284 8765 160 9.89313 15.829008 Aspergillus 5052 Fungi Fungi 296 5.55e-76   NTclustered gi|734797616|gb|KM582668.1| 41959 g8558 i0 100 100 160 0 100 0 1 160 467 626 Aspergillus penicillioides strain S-11A-3 18S ribosomal RNA gene, partial sequence blastn 16000 296 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus penicillioides
7630692 7630692 PRJNA927284_P_NODE_8426_length_166_cov_4.905109_g8219_i0 PRJNA927284 8426 166 4.905109 8.14248094 root 1 Root_unresolved Root_unresolved 302 1.2500000000000001e-77   NTclustered gi|1275558205|ref|NG_055690.1| 4931 g8219 i0 100 114.885542168675 163 0 98 0 4 166 3068 2906 Saccharomyces bayanus NRRL Y-12624 28S rRNA gene, partial sequence; from TYPE material blastn 19071 302 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces bayanus
7630695 7630695 PRJNA927284_P_NODE_926_length_804_cov_14.632258_g797_i0 PRJNA927284 926 804 14.632258 117.64335432 root 1 Root_unresolved Root_unresolved 660 0   NTclustered gi|1102645715|gb|KY109285.1| 4932 g797 i0 95.833 54.8059701492537 408 17 51 0 383 790 448 41 Saccharomyces cerevisiae culture CBS:459 large subunit ribosomal RNA gene, partial sequence blastn 44064 660 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
9829644 9829644 PRJNA927284_P_NODE_6528_length_205_cov_5.198864_g6321_i0 PRJNA927284 6528 205 5.198864 10.6576712 Penicillium citrinum 5077 Fungi Fungi 60.2 1.07e-4   NTclustered gi|2513254669|ref|XM_056645251.1| 5077 g6321 i0 94.737 0.341463414634146 38 2 19 0 167 204 731 694 Penicillium citrinum uncharacterized protein (N7469_006333), partial mRNA blastn 70 60.2 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium citrinum
10181234 10181234 PRJNA927284_P_NODE_6388_length_209_cov_20.444444_g6181_i0 PRJNA927284 6388 209 20.444444 42.72888796 Ascomycota 4890 Fungi Fungi 235 1.6999999999999998e-57   NTclustered gi|383793395|gb|JQ691482.1| 60348 g6181 i0 96.479 67.9665071770335 142 5 68 0 2 143 414 555 Morchella vulgaris isolate HAI-C-1217 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14205 235 1 Eukaryota Opisthokonta Fungi Ascomycota Pezizomycetes Pezizales Morchellaceae Morchella Morchella vulgaris
16204849 16204849 PRJNA927284_P_NODE_5693_length_231_cov_2.133663_g5486_i0 PRJNA927284 5693 231 2.133663 4.92876153 [Candida] sp. YM24510 1150187 Fungi Fungi 82.4 2.63e-11   NTclustered gi|377552366|gb|JN936885.1| 1150187 g5486 i0 96 2.6969696969697 50 2 22 0 91 140 84 133 Candida sp. YM24510 26S ribosomal RNA gene, partial sequence blastn 623 82.4 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales     [Candida] sp. YM24510
17830065 17830065 PRJNA927284_P_NODE_7854_length_177_cov_1.783784_g7647_i0 PRJNA927284 7854 177 1.783784 3.15729768 Ascomycota 4890 Fungi Fungi 327 2.2199999999999996e-85   NTclustered gi|513798264|gb|KF214335.1| 5476 g7647 i0 100 100 177 0 100 0 1 177 534 358 Candida albicans strain T30-NL1 28S ribosomal RNA gene, partial sequence blastn 17700 327 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida albicans
20378888 20378888 PRJNA927284_P_NODE_3476_length_343_cov_5.184713_g3271_i0 PRJNA927284 3476 343 5.184713 17.78356559 Eukaryota 2759 Fungi Fungi 532 9.5e-147   NTclustered gi|225134683|gb|FJ345355.1| 5076 g3271 i0 94.752 105.075801749271 343 17 100 1 1 343 3880 3539 Penicillium chrysogenum strain ATCC 10108 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 36041 532 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium chrysogenum
21654812 21654812 PRJNA927284_P_NODE_3157_length_368_cov_12.808260_g2952_i0 PRJNA927284 3157 368 12.80826 47.1343968 Colletotrichum 5455 Fungi Fungi 531 3.68e-146   NTclustered gi|2624723891|gb|OR881396.1| 34409 g2952 i0 92.683 117.684782608696 369 26 100 1 1 368 5200 5568 Colletotrichum sp. isolate 21SaKS_TLI001 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 43308 536 0.990671641791045 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Glomerellaceae Colletotrichum Colletotrichum sp.
21654816 21654816 PRJNA927284_P_NODE_4037_length_306_cov_16.851986_g3830_i0 PRJNA927284 4037 306 16.851986 51.56707716 Ascomycota 4890 Fungi Fungi 531 3.0099999999999998e-146   NTclustered gi|1938233393|gb|MW299443.1| 5065 g3830 i0 99.317 95.8039215686274 293 2 96 0 1 293 778 486 Aspergillus sp. isolate 928500-35 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 29316 536 0.990671641791045 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus sp.
21654820 21654820 PRJNA927284_P_NODE_6357_length_210_cov_20.701657_g6150_i0 PRJNA927284 6357 210 20.701657 43.4734797 Ascomycota 4890 Fungi Fungi 235 1.6999999999999998e-57   NTclustered gi|383793395|gb|JQ691482.1| 60348 g6150 i0 96.479 67.6428571428571 142 5 68 0 2 143 414 555 Morchella vulgaris isolate HAI-C-1217 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14205 235 1 Eukaryota Opisthokonta Fungi Ascomycota Pezizomycetes Pezizales Morchellaceae Morchella Morchella vulgaris
22579011 22579011 PRJNA927284_P_NODE_58_length_2589_cov_2.875000_g45_i0 PRJNA927284 58 2589 2.875 74.43375 Penicillium citrinum 5077 Fungi Fungi 60.2 0.002   NTclustered gi|2513254669|ref|XM_056645251.1| 5077 g45 i0 94.737 0.0146774816531479 38 2 1 0 2 39 694 731 Penicillium citrinum uncharacterized protein (N7469_006333), partial mRNA blastn 38 60.2 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium citrinum
22930332 22930332 PRJNA927284_P_NODE_4218_length_297_cov_13.746269_g4011_i0 PRJNA927284 4218 297 13.746269 40.82641893 Ascomycota 4890 Fungi Fungi 261 4.21e-65   NTclustered gi|1143640060|gb|KX953634.1| 5065 g4011 i0 100 47.4781144781145 141 0 47 0 4 144 352 212 Aspergillus sp. strain SAP353 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 14101 263 0.992395437262357 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus sp.
22930338 22930338 PRJNA927284_P_NODE_5998_length_221_cov_10.083333_g5791_i0 PRJNA927284 5998 221 10.083333 22.28416593 Sordariomycetes 147550 Fungi Fungi 355 1.33e-93   NTclustered gi|1584168689|gb|MK577428.1| 37992 g5791 i0 95.516 104.9592760181 223 8 100 2 1 221 5429 5651 Xylaria hypoxylon strain DSM 108379 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 23196 355 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Xylariales Xylariaceae Xylaria Xylaria hypoxylon
25479161 25479161 PRJNA927284_P_NODE_4660_length_274_cov_7.077551_g4453_i0 PRJNA927284 4660 274 7.077551 19.39248974 root 1 Root_unresolved Root_unresolved 505 1.61e-138   NTclustered gi|1389182097|gb|CP029160.1| 4932 g4453 i0 100 116.043795620438 273 0 99 0 1 273 3880326 3880598 Saccharomyces cerevisiae strain SY14 chromosome I, complete sequence blastn 31796 505 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
25479162 25479162 PRJNA927284_P_NODE_4740_length_270_cov_19.788382_g4533_i0 PRJNA927284 4740 270 19.788382 53.4286314 Aspergillaceae 1131492 Fungi Fungi 449 7.51e-122   NTclustered gi|356894049|gb|JF922029.1| 41413 g4533 i0 98.431 94.4444444444444 255 4 94 0 3 257 524 270 Aspergillus glaucus strain CBS516.65 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 25500 449 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus glaucus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;