contig_metadata
27 rows where analysis = "blastn", bioproject = "PRJNA927284" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 901881 | 901881 | PRJNA927284_P_NODE_5641_length_233_cov_1.715686_g5434_i0 | PRJNA927284 | 5641 | 233 | 1.715686 | 3.99754838 | Streptomyces halobius | 2879846 | Bacteria | Bacteria | 60.2 | 1.25e-4 | NTclustered | gi|2235503620|gb|CP086322.1| | 2879846 | g5434 | i0 | 100 | 0.137339055793991 | 32 | 0 | 14 | 0 | 116 | 147 | 8176481 | 8176450 | Streptomyces halobius strain 3_2 chromosome, complete genome | blastn | 32 | 60.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces halobius | ||
| 901894 | 901894 | PRJNA927284_P_NODE_7821_length_177_cov_4.972973_g7614_i0 | PRJNA927284 | 7821 | 177 | 4.972973 | 8.80216221 | Rothia aeria | 172042 | Bacteria | Bacteria | 222 | 1.08e-53 | NTclustered | gi|2072522805|gb|CP079819.1| | 172042 | g7614 | i0 | 89.444 | 312.276836158192 | 180 | 14 | 100 | 5 | 1 | 177 | 521673 | 521850 | Rothia aeria strain LPB0401 chromosome, complete genome | blastn | 55273 | 222 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia aeria | ||
| 1252576 | 1252576 | PRJNA927284_P_NODE_1441_length_617_cov_31.954082_g1285_i0 | PRJNA927284 | 1441 | 617 | 31.954082 | 197.15668594 | Corynebacterium | 1716 | Bacteria | Bacteria | 926 | 0 | NTclustered | gi|2869842788|gb|CP175780.1| | 38304 | g1285 | i0 | 93.994 | 383.26904376013 | 616 | 30 | 100 | 6 | 1 | 614 | 373502 | 374112 | Corynebacterium tuberculostearicum strain YSMAA1_2_H3 chromosome, complete genome | blastn | 236477 | 928 | 0.997844827586207 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium tuberculostearicum | ||
| 2177190 | 2177190 | PRJNA927284_P_NODE_1602_length_576_cov_11.318099_g1000_i1 | PRJNA927284 | 1602 | 576 | 11.318099 | 65.19225024 | Naasia aerilata | 1162966 | Bacteria | Bacteria | 634 | 4.4399999999999985e-177 | NTclustered | gi|2465733196|dbj|AP027731.1| | 1162966 | g1000 | i1 | 90.928 | 161.506944444444 | 474 | 39 | 82 | 3 | 20 | 491 | 3197637 | 3197166 | Naasia aerilata NBRC 108725 DNA, complete genome | blastn | 93028 | 634 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Naasia | Naasia aerilata | ||
| 2177203 | 2177203 | PRJNA927284_P_NODE_2922_length_387_cov_8.829609_g2720_i0 | PRJNA927284 | 2922 | 387 | 8.829609 | 34.17058683 | Rothia aeria | 172042 | Bacteria | Bacteria | 675 | 0 | NTclustered | gi|1958291603|gb|CP068102.1| | 172042 | g2720 | i0 | 98.191 | 389.97157622739 | 387 | 5 | 100 | 1 | 1 | 387 | 672477 | 672093 | Rothia aeria strain FDAARGOS_1137 chromosome, complete genome | blastn | 150919 | 675 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia aeria | ||
| 2528259 | 2528259 | PRJNA927284_P_NODE_7982_length_174_cov_4.117241_g7775_i0 | PRJNA927284 | 7982 | 174 | 4.117241 | 7.16399934 | Actinomyces | 1654 | Bacteria | Bacteria | 322 | 1.01e-83 | NTclustered | gi|1948661326|gb|CP066049.1| | 1655 | g7775 | i0 | 100 | 164.597701149425 | 174 | 0 | 100 | 0 | 1 | 174 | 298069 | 297896 | Actinomyces naeslundii strain FDAARGOS_1037 chromosome, complete genome | blastn | 28640 | 322 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Actinomyces | Actinomyces naeslundii | ||
| 6356609 | 6356609 | PRJNA927284_P_NODE_4565_length_278_cov_9.108434_g4358_i0 | PRJNA927284 | 4565 | 278 | 9.108434 | 25.32144652 | Corynebacterium | 1716 | Bacteria | Bacteria | 429 | 1.0099999999999999e-115 | NTclustered | gi|2869804070|gb|CP175770.1| | 38304 | g4358 | i0 | 94.624 | 367.212230215827 | 279 | 11 | 100 | 3 | 1 | 278 | 990699 | 990424 | Corynebacterium tuberculostearicum strain YSMAA5_1_B12 chromosome, complete genome | blastn | 102085 | 429 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium tuberculostearicum | ||
| 7279958 | 7279958 | PRJNA927284_P_NODE_9366_length_150_cov_1.752066_g9159_i0 | PRJNA927284 | 9366 | 150 | 1.752066 | 2.628099 | Dermacoccus nishinomiyaensis | 1274 | Bacteria | Bacteria | 278 | 1.85e-70 | NTclustered | gi|1966870119|gb|CP068484.1| | 1274 | g9159 | i0 | 100 | 174.553333333333 | 150 | 0 | 100 | 0 | 1 | 150 | 127120 | 127269 | Dermacoccus nishinomiyaensis strain FDAARGOS_1119 chromosome | blastn | 26183 | 278 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Dermacoccaceae | Dermacoccus | Dermacoccus nishinomiyaensis | ||
| 8905355 | 8905355 | PRJNA927284_P_NODE_1427_length_621_cov_38.819257_g1271_i0 | PRJNA927284 | 1427 | 621 | 38.819257 | 241.06758597 | Microbacteriaceae | 85023 | Bacteria | Bacteria | 809 | 0 | NTclustered | gi|1026621770|gb|CP015515.1| | 33888 | g1271 | i0 | 90.468 | 180.547504025765 | 619 | 51 | 99 | 8 | 1 | 617 | 1190525 | 1189913 | Rathayibacter tritici strain NCPPB 1953, complete genome | blastn | 112120 | 813 | 0.995079950799508 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Rathayibacter | Rathayibacter tritici | ||
| 8905366 | 8905366 | PRJNA927284_P_NODE_907_length_818_cov_34.989861_g782_i0 | PRJNA927284 | 907 | 818 | 34.989861 | 286.21706298 | Corynebacterium | 1716 | Bacteria | Bacteria | 1371 | 0 | NTclustered | gi|470484386|ref|NR_076645.1| | 161879 | g782 | i0 | 97.059 | 447.841075794621 | 816 | 20 | 99 | 4 | 1 | 815 | 15 | 827 | Corynebacterium kroppenstedtii strain DSM 44385 23S ribosomal RNA gene, complete sequence | blastn | 366334 | 1376 | 0.996366279069767 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium kroppenstedtii | ||
| 9829618 | 9829618 | PRJNA927284_P_NODE_2608_length_418_cov_32.745501_g2409_i0 | PRJNA927284 | 2608 | 418 | 32.745501 | 136.87619418 | Dermacoccus nishinomiyaensis | 1274 | Bacteria | Bacteria | 617 | 3.16e-172 | NTclustered | gi|664687059|gb|CP008889.1| | 1274 | g2409 | i0 | 93.51 | 176.320574162679 | 416 | 25 | 99 | 2 | 1 | 416 | 1844720 | 1844307 | Dermacoccus nishinomiyaensis strain M25, complete genome | blastn | 73702 | 617 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Dermacoccaceae | Dermacoccus | Dermacoccus nishinomiyaensis | ||
| 10181222 | 10181222 | PRJNA927284_P_NODE_1168_length_696_cov_22.490255_g1028_i0 | PRJNA927284 | 1168 | 696 | 22.490255 | 156.5321748 | Mycobacteriales | 85007 | Bacteria | Bacteria | 776 | 0 | NTclustered | gi|1723592958|emb|LR584267.1| | 1528099 | g1028 | i0 | 88.462 | 365.271551724138 | 650 | 66 | 93 | 8 | 51 | 696 | 552993 | 552349 | Lawsonella clevelandensis isolate USB-603019 genome assembly, chromosome: 1 | blastn | 254229 | 776 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 10181232 | 10181232 | PRJNA927284_P_NODE_5708_length_230_cov_4.776119_g5501_i0 | PRJNA927284 | 5708 | 230 | 4.776119 | 10.9850737 | Rothia | 32207 | Bacteria | Bacteria | 425 | 1.05e-114 | NTclustered | gi|2894499433|gb|CP178330.1| | 2047 | g5501 | i0 | 100 | 188.591304347826 | 230 | 0 | 100 | 0 | 1 | 230 | 902754 | 902525 | Rothia dentocariosa strain SOSUI028 chromosome, complete genome | blastn | 43376 | 425 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia dentocariosa | ||
| 12732006 | 12732006 | PRJNA927284_P_NODE_2310_length_455_cov_96.800469_g2118_i0 | PRJNA927284 | 2310 | 455 | 96.800469 | 440.44213395 | root | 1 | Root_unresolved | Root_unresolved | 647 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g2118 | i0 | 100 | 149.938461538462 | 350 | 0 | 77 | 0 | 1 | 350 | 53961 | 53612 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 68222 | 647 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 17830058 | 17830058 | PRJNA927284_P_NODE_3774_length_322_cov_36.617747_g3568_i0 | PRJNA927284 | 3774 | 322 | 36.617747 | 117.90914534 | Micrococcales | 85006 | Bacteria | Bacteria | 553 | 6.799999999999998e-153 | NTclustered | gi|2017475128|gb|CP049819.1| | 156980 | g3568 | i0 | 97.812 | 369.593167701863 | 320 | 7 | 99 | 0 | 2 | 321 | 3106 | 2787 | Arthrobacter woluwensis strain QTS chromosome, complete genome | blastn | 119009 | 555 | 0.996396396396396 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Arthrobacter | Arthrobacter woluwensis | ||
| 17830069 | 17830069 | PRJNA927284_P_NODE_9154_length_153_cov_2.475806_g8947_i0 | PRJNA927284 | 9154 | 153 | 2.475806 | 3.78798318 | Schaalia | 2529408 | Bacteria | Bacteria | 283 | 4.0799999999999995e-72 | NTclustered | gi|1663040979|gb|CP040006.1| | 1660 | g8947 | i0 | 100 | 247.339869281046 | 153 | 0 | 100 | 0 | 1 | 153 | 535039 | 535191 | Schaalia odontolytica strain XH001 chromosome, complete genome | blastn | 37843 | 283 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Schaalia | Schaalia odontolytica | ||
| 18753413 | 18753413 | PRJNA927284_P_NODE_2255_length_462_cov_6.547344_g2063_i0 | PRJNA927284 | 2255 | 462 | 6.547344 | 30.24872928 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 773 | 0 | NTclustered | gi|1723592958|emb|LR584267.1| | 1528099 | g2063 | i0 | 97.561 | 254.337662337662 | 451 | 11 | 98 | 0 | 3 | 453 | 553232 | 553682 | Lawsonella clevelandensis isolate USB-603019 genome assembly, chromosome: 1 | blastn | 117504 | 773 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 19104032 | 19104032 | PRJNA927284_P_NODE_8815_length_159_cov_4.800000_g8608_i0 | PRJNA927284 | 8815 | 159 | 4.8 | 7.632 | Microbacteriaceae | 85023 | Bacteria | Bacteria | 187 | 3.459999999999999e-43 | NTclustered | gi|2667034633|dbj|AP029214.1| | 69366 | g8608 | i0 | 97.273 | 135.119496855346 | 110 | 3 | 69 | 0 | 50 | 159 | 1619596 | 1619487 | Microbacterium flavescens JCM 11568 DNA, unplaced contig sequence4 | blastn | 21484 | 187 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium flavescens | ||
| 20028491 | 20028491 | PRJNA927284_P_NODE_6716_length_200_cov_16.380117_g6509_i0 | PRJNA927284 | 6716 | 200 | 16.380117 | 32.760234 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 331 | 1.99e-86 | NTclustered | gi|1723592958|emb|LR584267.1| | 1528099 | g6509 | i0 | 96.5 | 338.425 | 200 | 7 | 100 | 0 | 1 | 200 | 552741 | 552542 | Lawsonella clevelandensis isolate USB-603019 genome assembly, chromosome: 1 | blastn | 67685 | 331 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 20378889 | 20378889 | PRJNA927284_P_NODE_3576_length_337_cov_2.577922_g3371_i0 | PRJNA927284 | 3576 | 337 | 2.577922 | 8.68759714 | Corynebacterium | 1716 | Bacteria | Bacteria | 623 | 5.369999999999999e-174 | NTclustered | gi|2809007534|gb|CP119163.1| | 2736648 | g3371 | i0 | 100 | 100.172106824926 | 337 | 0 | 100 | 0 | 1 | 337 | 1819516 | 1819180 | Corynebacterium kroppenstedtii subsp. demodicis strain Df-1 chromosome, complete genome | blastn | 33758 | 623 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium kroppenstedtii | ||
| 21303842 | 21303842 | PRJNA927284_P_NODE_1177_length_694_cov_20.067669_g1037_i0 | PRJNA927284 | 1177 | 694 | 20.067669 | 139.26962286 | Dermacoccus nishinomiyaensis | 1274 | Bacteria | Bacteria | 547 | 7.249999999999997e-151 | NTclustered | gi|664687059|gb|CP008889.1| | 1274 | g1037 | i0 | 92.857 | 130.472622478386 | 378 | 25 | 54 | 2 | 3 | 380 | 1844307 | 1844682 | Dermacoccus nishinomiyaensis strain M25, complete genome | blastn | 90548 | 547 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Dermacoccaceae | Dermacoccus | Dermacoccus nishinomiyaensis | ||
| 21654809 | 21654809 | PRJNA927284_P_NODE_1977_length_503_cov_18.567511_g1790_i0 | PRJNA927284 | 1977 | 503 | 18.567511 | 93.39458033 | Actinomyces | 1654 | Bacteria | Bacteria | 604 | 3.009999999999999e-168 | NTclustered | gi|1948687139|gb|CP066060.1| | 544580 | g1790 | i0 | 90.83 | 300.508946322068 | 458 | 33 | 90 | 8 | 1 | 453 | 944823 | 944370 | Actinomyces oris strain FDAARGOS_1051 chromosome, complete genome | blastn | 151156 | 606 | 0.996699669966997 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Actinomyces | Actinomyces oris | ||
| 21654813 | 21654813 | PRJNA927284_P_NODE_3237_length_361_cov_3.867470_g3032_i0 | PRJNA927284 | 3237 | 361 | 3.86747 | 13.9615667 | Cutibacterium | 1912216 | Bacteria | Bacteria | 662 | 0 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g3032 | i0 | 99.723 | 143.595567867036 | 361 | 1 | 100 | 0 | 1 | 361 | 1444350 | 1443990 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 51838 | 662 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 22930324 | 22930324 | PRJNA927284_P_NODE_1518_length_596_cov_28.987654_g1354_i0 | PRJNA927284 | 1518 | 596 | 28.987654 | 172.76641784 | Actinomyces | 1654 | Bacteria | Bacteria | 843 | 0 | NTclustered | gi|1866749869|gb|CP058259.1| | 712116 | g1354 | i0 | 92.231 | 379.073825503356 | 605 | 32 | 100 | 13 | 1 | 593 | 952755 | 953356 | Actinomyces sp. oral taxon 169 strain F0496 chromosome, complete genome | blastn | 225928 | 843 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Actinomyces | Actinomyces sp. oral taxon 169 | ||
| 23854113 | 23854113 | PRJNA927284_P_NODE_1139_length_704_cov_28.331852_g1000_i0 | PRJNA927284 | 1139 | 704 | 28.331852 | 199.45623808 | Herbiconiux sp. L3-i23 | 2905871 | Bacteria | Bacteria | 931 | 0 | NTclustered | gi|2238890657|dbj|AP025737.1| | 2905871 | g1000 | i0 | 91.304 | 178.980113636364 | 690 | 49 | 97 | 8 | 1 | 685 | 1092275 | 1091592 | Herbiconiux sp. L3-i23 L3-i23 DNA, complete genome | blastn | 126002 | 931 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Herbiconiux | Herbiconiux sp. L3-i23 | ||
| 23854115 | 23854115 | PRJNA927284_P_NODE_1239_length_676_cov_26.383308_g1097_i0 | PRJNA927284 | 1239 | 676 | 26.383308 | 178.35116208 | Rothia mucilaginosa | 43675 | Bacteria | Bacteria | 1184 | 0 | NTclustered | gi|1247210625|gb|CP023510.1| | 43675 | g1097 | i0 | 98.516 | 337.247041420118 | 674 | 5 | 99 | 3 | 1 | 674 | 654087 | 653419 | Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome | blastn | 227979 | 1184 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia mucilaginosa | ||
| 25479156 | 25479156 | PRJNA927284_P_NODE_1600_length_576_cov_33.038391_g1432_i0 | PRJNA927284 | 1600 | 576 | 33.038391 | 190.30113216 | Microbacteriaceae | 85023 | Bacteria | Bacteria | 889 | 0 | NTclustered | gi|2528150176|gb|CP128474.1| | 33883 | g1432 | i0 | 94.599 | 184.621527777778 | 574 | 31 | 99 | 0 | 1 | 574 | 2056792 | 2056219 | Microbacterium arborescens strain SSF12 chromosome, complete genome | blastn | 106342 | 896 | 0.9921875 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium arborescens |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;