contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA927284" and tax_clade = "Discoba"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2177238 | 2177238 | PRJNA927284_P_NODE_8382_length_167_cov_2.115942_g8175_i0 | PRJNA927284 | 8382 | 167 | 2.115942 | 3.53362314 | Naegleria australiensis | 51634 | Heterolobosea | other_Eukaryota | 309 | 7.53e-80 | NTclustered | gi|2476253407|gb|OQ627480.1| | 51634 | g8175 | i0 | 100 | 64.1796407185629 | 167 | 0 | 100 | 0 | 1 | 167 | 2343 | 2509 | Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence | blastn | 10718 | 309 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria australiensis | ||||
| 6005047 | 6005047 | PRJNA927284_P_NODE_6225_length_215_cov_1.575269_g6018_i0 | PRJNA927284 | 6225 | 215 | 1.575269 | 3.38682835 | Naegleria gruberi | 5762 | Heterolobosea | other_Eukaryota | 337 | 4.67e-88 | NTclustered | gi|290988433|ref|XM_002676880.1| | 5762 | g6018 | i0 | 94.884 | 25.0186046511628 | 215 | 11 | 100 | 0 | 1 | 215 | 1140 | 1354 | Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82621), mRNA | blastn | 5379 | 337 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria gruberi | ||||
| 6356610 | 6356610 | PRJNA927284_P_NODE_6805_length_198_cov_5.349112_g6598_i0 | PRJNA927284 | 6805 | 198 | 5.349112 | 10.59124176 | Trypanosomatidae | 5654 | Euglenozoa | other_Eukaryota | 259 | 9.42e-65 | NTclustered | gi|2414483|emb|Y00055.1| | 5656 | g6598 | i0 | 91.146 | 118.166666666667 | 192 | 16 | 97 | 1 | 1 | 192 | 7025 | 6835 | Crithidia fasciculata ribosomal DNA repeat (complete) | blastn | 23397 | 261 | 0.992337164750958 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Crithidia | Crithidia fasciculata | ||
| 7279951 | 7279951 | PRJNA927284_P_NODE_8966_length_157_cov_1.609375_g8759_i0 | PRJNA927284 | 8966 | 157 | 1.609375 | 2.52671875 | Trypanosoma melophagium | 715481 | Euglenozoa | other_Eukaryota | 152 | 1.24e-32 | NTclustered | gi|2787690114|ref|XM_067335207.1| | 715481 | g8759 | i0 | 84.076 | 45.8917197452229 | 157 | 25 | 100 | 0 | 1 | 157 | 322 | 166 | Trypanosoma melophagium Ribosomal protein L11 (LSM04_005035), partial mRNA | blastn | 7205 | 152 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Trypanosoma | Trypanosoma melophagium | ||
| 7630686 | 7630686 | PRJNA927284_P_NODE_6226_length_215_cov_1.456989_g6019_i0 | PRJNA927284 | 6226 | 215 | 1.456989 | 3.13252635 | Naegleria | 5761 | Heterolobosea | other_Eukaryota | 398 | 2.1099999999999997e-106 | NTclustered | gi|2618963742|gb|OR769034.1| | 5762 | g6019 | i0 | 100 | 37.0139534883721 | 215 | 0 | 100 | 0 | 1 | 215 | 5315 | 5101 | Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence | blastn | 7958 | 398 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria gruberi | ||||
| 8554692 | 8554692 | PRJNA927284_P_NODE_2287_length_457_cov_17.885514_g2095_i0 | PRJNA927284 | 2287 | 457 | 17.885514 | 81.73679898 | Trypanosoma theileri | 67003 | Euglenozoa | other_Eukaryota | 645 | 1.5999999999999996e-180 | NTclustered | gi|2026667530|dbj|LC618030.1| | 67003 | g2095 | i0 | 92.043 | 143.763676148796 | 465 | 28 | 100 | 7 | 1 | 457 | 4802 | 4339 | Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence | blastn | 65700 | 645 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Trypanosoma | Trypanosoma theileri | ||
| 11105476 | 11105476 | PRJNA927284_P_NODE_8629_length_163_cov_1.582090_g8422_i0 | PRJNA927284 | 8629 | 163 | 1.58209 | 2.5788067 | Naegleria gruberi | 5762 | Heterolobosea | other_Eukaryota | 154 | 3.62e-33 | NTclustered | gi|290981449|ref|XM_002673397.1| | 5762 | g8422 | i0 | 86.957 | 33.638036809816 | 138 | 16 | 84 | 2 | 2 | 138 | 357 | 493 | Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55855), mRNA | blastn | 5483 | 154 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria gruberi | ||||
| 14006603 | 14006603 | PRJNA927284_P_NODE_8131_length_171_cov_4.338028_g7924_i0 | PRJNA927284 | 8131 | 171 | 4.338028 | 7.41802788 | Leishmania | 5658 | Euglenozoa | other_Eukaryota | 257 | 2.83e-64 | NTclustered | gi|440222388|gb|JX030056.1| | 5659 | g7924 | i0 | 94.083 | 88.672514619883 | 169 | 10 | 99 | 0 | 2 | 170 | 181 | 13 | Leishmania amazonensis isolate LaPH8.rRNA.32 28S ribosomal RNA (LSU-delta M2), partial sequence | blastn | 15163 | 257 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Leishmania | Leishmania amazonensis | ||
| 16555054 | 16555054 | PRJNA927284_P_NODE_2253_length_462_cov_11.736721_g2061_i0 | PRJNA927284 | 2253 | 462 | 11.736721 | 54.22365102 | Leishmania | 5658 | Euglenozoa | other_Eukaryota | 436 | 1.06e-117 | NTclustered | gi|2593250474|emb|OY748421.1| | 5660 | g2061 | i0 | 83.91 | 114.290043290043 | 491 | 44 | 100 | 21 | 1 | 462 | 991046 | 990562 | Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 | blastn | 52802 | 436 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Leishmania | Leishmania braziliensis | ||
| 20028475 | 20028475 | PRJNA927284_P_NODE_396_length_1289_cov_15.494444_g320_i0 | PRJNA927284 | 396 | 1289 | 15.494444 | 199.72338316 | Neobodo designis | 312471 | Euglenozoa | other_Eukaryota | 1919 | 0 | NTclustered | gi|197723537|gb|EF681922.2| | 312471 | g320 | i0 | 94.569 | 133.11249030256 | 1252 | 50 | 97 | 13 | 1 | 1244 | 1242 | 1 | Neobodo designis strain HFCC97 28S ribosomal RNA gene, partial sequence | blastn | 171582 | 1919 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Neobodonida | Neobodo | Neobodo designis | |||
| 20028501 | 20028501 | PRJNA927284_P_NODE_776_length_896_cov_4.152249_g661_i0 | PRJNA927284 | 776 | 896 | 4.152249 | 37.20415104 | Naegleria australiensis | 51634 | Heterolobosea | other_Eukaryota | 1650 | 0 | NTclustered | gi|32479131|gb|AY321362.1| | 51634 | g661 | i0 | 99.888 | 94.2488839285714 | 896 | 1 | 100 | 0 | 1 | 896 | 435 | 1330 | Naegleria australiensis isolate TT 18S ribosomal RNA gene, partial sequence | blastn | 84447 | 1650 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria australiensis | ||||
| 22579035 | 22579035 | PRJNA927284_P_NODE_8618_length_163_cov_1.768657_g8411_i0 | PRJNA927284 | 8618 | 163 | 1.768657 | 2.88291091 | Naegleria gruberi | 5762 | Heterolobosea | other_Eukaryota | 265 | 1.6e-66 | NTclustered | gi|290975864|ref|XM_002670616.1| | 5762 | g8411 | i0 | 96.296 | 15.9877300613497 | 162 | 4 | 99 | 2 | 1 | 161 | 522 | 362 | Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55913), mRNA | blastn | 2606 | 265 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria gruberi | ||||
| 22930329 | 22930329 | PRJNA927284_P_NODE_2258_length_462_cov_3.191686_g2066_i0 | PRJNA927284 | 2258 | 462 | 3.191686 | 14.74558932 | Naegleria | 5761 | Heterolobosea | other_Eukaryota | 852 | 0 | NTclustered | gi|32479131|gb|AY321362.1| | 51634 | g2066 | i0 | 100 | 97.8484848484848 | 461 | 0 | 99 | 0 | 1 | 461 | 1353 | 1813 | Naegleria australiensis isolate TT 18S ribosomal RNA gene, partial sequence | blastn | 45206 | 852 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria australiensis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;