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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA924320" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA924320 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1252173 1252173 PRJNA924320_S_NODE_27921_length_204_cov_2.180645_g27779_i0 PRJNA924320 27921 204 2.180645 4.4485158 Metazoa 33208 Mollusca Mollusca 377 2.59e-100   NTclustered gi|1928112764|gb|MT947788.1| 6523 g27779 i0 100 100 204 0 100 0 1 204 1287 1084 Lymnaea stagnalis isolate Lsta_434075 hypothetical protein mRNA, complete cds blastn 20400 377 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
3804234 3804234 PRJNA924320_S_NODE_38083_length_181_cov_1.159091_g37941_i0 PRJNA924320 38083 181 1.159091 2.09795471 Metazoa 33208 Mollusca Mollusca 165 1.89e-36   NTclustered gi|676453046|ref|XM_009054981.1| 225164 g37941 i0 89.844 27.060773480663 128 13 71 0 7 134 251 124 Lottia gigantea hypothetical protein mRNA blastn 4898 165 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
6002592 6002592 PRJNA924320_S_NODE_9865_length_312_cov_1.479087_g9723_i0 PRJNA924320 9865 312 1.479087 4.61475144 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.029   NTclustered gi|2912983111|dbj|AP039588.1| 145626 g9723 i0 94.286 0.112179487179487 35 1 11 1 1 34 19213725 19213691 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 7, sequence blastn 35 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
8552327 8552327 PRJNA924320_S_NODE_52367_length_164_cov_0.886957_g52225_i0 PRJNA924320 52367 164 0.886957 1.45460948 Bradybaena similaris 145626 Mollusca Mollusca 62.1 2.27e-5   NTclustered gi|2912987826|dbj|AP039592.1| 145626 g52225 i0 95 4.21951219512195 40 0 23 2 107 144 23997909 23997870 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 11, sequence blastn 692 62.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
12378188 12378188 PRJNA924320_S_NODE_20810_length_228_cov_1.424581_g20668_i0 PRJNA924320 20810 228 1.424581 3.24804468 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.006   NTclustered gi|2913001038|dbj|AP039608.1| 145626 g20668 i0 100 0.12719298245614 29 0 13 0 106 134 9147465 9147493 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 27, sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
12378380 12378380 PRJNA924320_S_NODE_42190_length_173_cov_1.637097_g42048_i0 PRJNA924320 42190 173 1.637097 2.83217781 Mya arenaria 6604 Mollusca Mollusca 56.5 0.001   NTclustered gi|2427417697|ref|XM_052927014.1| 6604 g42048 i0 100 0.173410404624277 30 0 17 0 106 135 1659 1688 PREDICTED: Mya arenaria DNA-directed RNA polymerase II subunit RPB1-like (LOC128219202), mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
12378526 12378526 PRJNA924320_S_NODE_58050_length_160_cov_5.342342_g57908_i0 PRJNA924320 58050 160 5.342342 8.5477472 Gigantopelta aegis 1735272 Mollusca Mollusca 54.7 0.004   NTclustered gi|2034283022|ref|XM_041515763.1| 1735272 g57908 i0 96.875 0.725 32 1 20 0 129 160 1747 1778 PREDICTED: Gigantopelta aegis uncharacterized LOC121385196 (LOC121385196), mRNA blastn 116 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
18750678 18750678 PRJNA924320_S_NODE_16295_length_251_cov_3.282178_g16153_i0 PRJNA924320 16295 251 3.282178 8.23826678 Patella vulgata 6465 Mollusca Mollusca 213 9.86e-51   NTclustered gi|2296443952|ref|XM_050562746.1| 6465 g16153 i0 82 71.2709163346614 250 45 99 0 1 250 304 55 PREDICTED: Patella vulgata tubulin beta chain-like (LOC126832052), mRNA blastn 17889 213 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
18750815 18750815 PRJNA924320_S_NODE_33475_length_190_cov_41.531915_g33333_i0 PRJNA924320 33475 190 41.531915 78.9106385 Mya arenaria 6604 Mollusca Mollusca 193 9.22e-45   NTclustered gi|2427407524|ref|XM_052923669.1| 6604 g33333 i0 86.034 88.2736842105263 179 25 94 0 5 183 155 333 PREDICTED: Mya arenaria tubulin alpha-1A chain-like (LOC128216942), mRNA blastn 16772 193 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
21301386 21301386 PRJNA924320_S_NODE_52337_length_164_cov_0.886957_g52195_i0 PRJNA924320 52337 164 0.886957 1.45460948 Liolophura japonica 13599 Mollusca Mollusca 78.7 2.26e-10   NTclustered gi|2724233349|ref|XM_064741741.1| 13599 g52195 i0 78.947 5.35365853658537 114 24 70 0 24 137 806 693 PREDICTED: Liolophura japonica mitogen-activated protein kinase 1-like (LOC135464236), mRNA blastn 878 78.7 1 Eukaryota Opisthokonta Metazoa Mollusca Polyplacophora Chitonida Chitonidae Liolophura Liolophura japonica
23851704 23851704 PRJNA924320_S_NODE_8439_length_334_cov_1.950877_g8297_i0 PRJNA924320 8439 334 1.950877 6.51592918 Littorina saxatilis 31220 Mollusca Mollusca 115 3.96e-21   NTclustered gi|2868639095|ref|XM_070351151.1| 31220 g8297 i0 83.077 17.6047904191617 130 18 38 4 176 303 1101 1228 PREDICTED: Littorina saxatilis enolase-like (LOC138978413), transcript variant X1, mRNA blastn 5880 115 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
24203767 24203767 PRJNA924320_S_NODE_46579_length_167_cov_0.864407_g46437_i0 PRJNA924320 46579 167 0.864407 1.44355969 Metazoa 33208 Mollusca Mollusca 54.7 0.004   NTclustered gi|871260641|ref|XM_005107622.2| 6500 g46437 i0 100 3.06586826347305 29 0 17 0 32 60 1349 1321 PREDICTED: Aplysia californica protein sine oculis (LOC101864327), mRNA blastn 512 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
25125186 25125186 PRJNA924320_S_NODE_26260_length_209_cov_1.700000_g26118_i0 PRJNA924320 26260 209 1.7 3.553 Mytilus californianus 6549 Mollusca Mollusca 56.5 0.001   NTclustered gi|2334608986|ref|XM_052206883.1| 6549 g26118 i0 94.444 0.172248803827751 36 2 17 0 96 131 2645 2610 PREDICTED: Mytilus californianus RING finger protein 11-like (LOC127702581), mRNA blastn 36 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
25478757 25478757 PRJNA924320_S_NODE_1460_length_745_cov_1.913793_g1353_i0 PRJNA924320 1460 745 1.913793 14.25775785 Metazoa 33208 Mollusca Mollusca 56.5 0.006   NTclustered gi|2245666867|ref|XM_046470698.2| 6454 g1353 i0 100 0.216107382550336 30 0 4 0 624 653 170 199 PREDICTED: Haliotis rufescens PITH domain-containing protein 1-like (LOC124111107), mRNA blastn 161 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;