RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA924320" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA924320 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
899070 899070 PRJNA924320_S_NODE_19401_length_234_cov_3.437838_g19259_i0 PRJNA924320 19401 234 3.437838 8.04454092 Heterostelium album 2086695 Evosea other_Eukaryota 213 9.08e-51   NTclustered gi|1160557950|ref|XM_020575808.1| 670386 g19259 i0 84.651 110.871794871795 215 31 91 2 20 233 1267 1054 Polysphondylium pallidum PN500 ubiquitin (ubqI), partial mRNA blastn 25944 213 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
3449926 3449926 PRJNA924320_S_NODE_1843_length_676_cov_1.883573_g1725_i0 PRJNA924320 1843 676 1.883573 12.73295348 Physarum polycephalum 5791 Evosea other_Eukaryota 58.4 0.001   NTclustered gi|4249354|gb|M38038.1|SLMPROP1 5791 g1725 i0 100 0.0458579881656805 31 0 5 0 301 331 740 710 Physarum polycephalum profilin P (proP) gene, complete cds blastn 31 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
3450005 3450005 PRJNA924320_S_NODE_27603_length_205_cov_1.634615_g27461_i0 PRJNA924320 27603 205 1.634615 3.35096075 Heterostelium album 2086695 Evosea other_Eukaryota 180 7.87e-41   NTclustered gi|1160556590|ref|XM_020574120.1| 670386 g27461 i0 84.021 35.8682926829268 194 23 93 6 12 201 330 141 Polysphondylium pallidum PN500 S-adenosylmethionine synthetase (metK), partial mRNA blastn 7353 180 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
4727612 4727612 PRJNA924320_S_NODE_22844_length_220_cov_1.789474_g22702_i0 PRJNA924320 22844 220 1.789474 3.9368428 Heterostelium album 2086695 Evosea other_Eukaryota 84.2 6.91e-12   NTclustered gi|1160566430|ref|XM_020580840.1| 670386 g22702 i0 79.412 1.46818181818182 136 14 57 7 21 146 311 180 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 323 84.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
6002379 6002379 PRJNA924320_S_NODE_35505_length_186_cov_1.605839_g35363_i0 PRJNA924320 35505 186 1.605839 2.98686054 Acytostelium leptosomum 133408 Evosea other_Eukaryota 165 1.96e-36   NTclustered gi|169930332|gb|EU360789.1| 133408 g35363 i0 82.796 86.2204301075269 186 30 99 2 1 185 853 669 Acytostelium leptosomum elongation factor 1 alpha gene, partial cds blastn 16037 165 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium leptosomum
18750985 18750985 PRJNA924320_S_NODE_54455_length_162_cov_2.026549_g54313_i0 PRJNA924320 54455 162 2.026549 3.28300938 Cavenderia fasciculata 261658 Evosea other_Eukaryota 180 5.93e-41   NTclustered gi|470266101|ref|XM_004361626.1| 261658 g54313 i0 87.261 28.2530864197531 157 20 97 0 4 160 940 784 Cavenderia fasciculata uncharacterized protein (DFA_05968), partial mRNA blastn 4577 180 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
20378485 20378485 PRJNA924320_S_NODE_19936_length_232_cov_1.114754_g19794_i0 PRJNA924320 19936 232 1.114754 2.58622928 Dictyostelium 5782 Evosea other_Eukaryota 154 5.53e-33   NTclustered gi|1912394|gb|U49169.1|DDU49169 44689 g19794 i0 86.861 1.59051724137931 137 18 59 0 82 218 1352 1216 Dictyostelium discoideum V-ATPase A subunit (vatA) mRNA, complete cds blastn 369 154 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;