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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA924320" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA924320 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2174661 2174661 PRJNA924320_S_NODE_50882_length_164_cov_1.773913_g50740_i0 PRJNA924320 50882 164 1.773913 2.90921732 Polychytrium aggregatum 110093 Fungi Fungi 152 1.31e-32   NTclustered gi|2432150950|ref|XM_053107694.1| 110093 g50740 i0 84.177 0.963414634146341 158 23 96 2 8 164 1807 1651 Polychytrium aggregatum elongation factor EF-3 (BJ171DRAFT_424968), partial mRNA blastn 158 152 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
6002388 6002388 PRJNA924320_S_NODE_36745_length_184_cov_0.866667_g36603_i0 PRJNA924320 36745 184 0.866667 1.59466728 Fimicolochytrium jonesii 1396493 Fungi Fungi 69.4 1.56e-7   NTclustered gi|2432085723|ref|XM_053072715.1| 1396493 g36603 i0 93.617 0.255434782608696 47 2 26 1 1 47 180 135 Fimicolochytrium jonesii ribosomal protein L6e-domain-containing protein (EV422DRAFT_569050), partial mRNA blastn 47 69.4 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
11102838 11102838 PRJNA924320_S_NODE_4509_length_444_cov_1.420253_g4368_i0 PRJNA924320 4509 444 1.420253 6.30592332 Fimicolochytrium jonesii 1396493 Fungi Fungi 137 1.1500000000000002e-27   NTclustered gi|2432100115|ref|XM_053071323.1| 1396493 g4368 i0 78.505 0.481981981981982 214 42 48 4 166 377 275 486 Fimicolochytrium jonesii 50S ribosomal protein L30e-like protein (EV422DRAFT_543230), mRNA blastn 214 137 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
14927061 14927061 PRJNA924320_S_NODE_22052_length_223_cov_1.528736_g21910_i0 PRJNA924320 22052 223 1.528736 3.40908128 Polychytrium aggregatum 110093 Fungi Fungi 231 2.3699999999999997e-56   NTclustered gi|2432143596|ref|XM_053110630.1| 110093 g21910 i0 85.52 37.6636771300448 221 32 99 0 3 223 487 267 Polychytrium aggregatum cyclophilin B precursor (BJ171DRAFT_501021), mRNA blastn 8399 231 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
16202035 16202035 PRJNA924320_S_NODE_17313_length_245_cov_2.336735_g17171_i0 PRJNA924320 17313 245 2.336735 5.72500075 Polychytrium aggregatum 110093 Fungi Fungi 145 3.5499999999999996e-30   NTclustered gi|2432147654|ref|XM_053111044.1| 110093 g17171 i0 80.102 49.5959183673469 196 37 80 2 51 245 608 802 Polychytrium aggregatum Enolase, C-terminal TIM barrel domain-containing protein (BJ171DRAFT_505639), mRNA blastn 12151 145 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
16554699 16554699 PRJNA924320_S_NODE_47753_length_166_cov_1.170940_g47611_i0 PRJNA924320 47753 166 1.17094 1.9437604 Fungi 4751 Fungi Fungi 158 2.8599999999999993e-34   NTclustered gi|2432132411|ref|XM_053109501.1| 110093 g47611 i0 87.05 44.4759036144578 139 18 84 0 1 139 766 904 Polychytrium aggregatum ribosomal protein L3-domain-containing protein (BJ171DRAFT_489537), mRNA blastn 7383 158 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
22576465 22576465 PRJNA924320_S_NODE_53558_length_163_cov_0.894737_g53416_i0 PRJNA924320 53558 163 0.894737 1.45842131 Polychytrium aggregatum 110093 Fungi Fungi 62.1 2.26e-5   NTclustered gi|2432131134|ref|XM_053109254.1| 110093 g53416 i0 97.222 0.220858895705521 36 1 22 0 43 78 178 143 Polychytrium aggregatum uncharacterized protein (BJ171DRAFT_487112), mRNA blastn 36 62.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;