RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA924320" and tax_kingdom = "Heunggongvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Heunggongvirae · 4 ✖

bioproject 1

  • PRJNA924320 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12378450 12378450 PRJNA924320_S_NODE_50510_length_165_cov_0.879310_g50368_i0 PRJNA924320 50510 165 0.87931 1.4508615 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.014   NTclustered gi|2060053595|tpg|BK028058.1| 2832643 g50368 i0 100 0.16969696969697 28 0 17 0 128 155 49390 49363 MAG TPA_asm: Caudoviricetes sp. isolate ctNaS19, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
17477606 17477606 PRJNA924320_S_NODE_7334_length_355_cov_3.660131_g7192_i0 PRJNA924320 7334 355 3.660131 12.99346505 Maltschvirus maltsch 2956182 Viruses Viruses 52.8 0.034   NTclustered gi|1862933311|emb|LR798231.1| 2100421 g7192 i0 100 0.157746478873239 28 0 8 0 68 95 322907 322880 uncultured Caudovirales phage genome assembly blastn 56 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
17829743 17829743 PRJNA924320_S_NODE_53494_length_163_cov_0.894737_g53352_i0 PRJNA924320 53494 163 0.894737 1.45842131 Viruses 10239 Viruses Viruses 279 5.73e-71   NTclustered gi|2314129646|tpd|BR001712.1| 2774419 g53352 i0 97.546 95.1963190184049 163 4 100 0 1 163 25545 25383 MAG TPA_asm: Siphovirus LN-2020-2 Modern44_CT89 DNA, nearly complete genome blastn 15517 279 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Siphovirus LN-2020-2
22929978 22929978 PRJNA924320_S_NODE_45678_length_167_cov_1.686441_g45536_i0 PRJNA924320 45678 167 1.686441 2.81635647 Lymphocryptovirus 10375 Viruses Viruses 309 7.53e-80   NTclustered gi|764011926|emb|LN827583.1| 10376 g45536 i0 100 101 167 0 100 0 1 167 159180 159346 Human herpesvirus 4 genome assembly sLCL-IM1.17, segment : I blastn 16867 309 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;