RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA924320" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA924320 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7277163 7277163 PRJNA924320_S_NODE_12846_length_277_cov_4.214912_g12704_i0 PRJNA924320 12846 277 4.214912 11.67530624 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 62.1 4.23e-5   NTclustered gi|2794902854|ref|XM_067913699.1| 135588 g12704 i0 100 11.7184115523466 33 0 12 0 4 36 3120 3152 Histomonas meleagridis uncharacterized protein (GO595_010963), partial mRNA blastn 3246 62.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
8552008 8552008 PRJNA924320_S_NODE_1567_length_722_cov_137.717682_g1458_i0 PRJNA924320 1567 722 137.717682 994.32166404 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 91.6 1.53e-13   NTclustered gi|1270119057|gb|MG264531.1| 2049346 g1458 i0 88.462 12.2520775623269 78 5 11 4 3 79 220 146 Blattamonas nauphoetae strain Z61EP small subunit ribosomal RNA gene, partial sequence blastn 8846 91.6 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae
17477497 17477497 PRJNA924320_S_NODE_47974_length_166_cov_0.871795_g47832_i0 PRJNA924320 47974 166 0.871795 1.4471797 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 52.8 0.014   NTclustered gi|2806468871|ref|XM_068507352.1| 1144522 g47832 i0 100 0.168674698795181 28 0 17 0 125 152 1129 1156 Tritrichomonas foetus uncharacterized protein (TRFO_30427), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;