RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA922890" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA922890 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9825623 9825623 PRJNA922890_P_NODE_32248_length_337_cov_1.507463_g31838_i0 PRJNA922890 32248 337 1.507463 5.08015031 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 453 7.46e-123   NTclustered gi|239584293|gb|FJ426408.1| 104788 g31838 i0 91.071 99.6261127596439 336 29 99 1 1 335 512 177 Macrotrachela quadricornifera isolate M.quad.TU.1.1 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial blastn 33574 453 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
10180490 10180490 PRJNA922890_P_NODE_10668_length_587_cov_15.718147_g10265_i0 PRJNA922890 10668 587 15.718147 92.26552289 Brachionus 10194 Rotifera other_Eukaryota 460 8.129999999999998e-125   NTclustered gi|1802791198|gb|MN256531.1| 392764 g10265 i0 82.569 54.0408858603066 545 73 91 19 33 566 11791 11258 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 31722 462 0.995670995670996 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
23849711 23849711 PRJNA922890_P_NODE_10319_length_598_cov_8.533081_g9916_i0 PRJNA922890 10319 598 8.533081 51.02782438 Brachionus rotundiformis 96890 Rotifera other_Eukaryota 401 5.099999999999999e-107   NTclustered gi|1066800225|gb|KX364936.1| 96890 g9916 i0 80.389 65.8595317725753 566 79 93 29 5 559 10044 9500 Brachionus rotundiformis chromosome I mitochondrion, complete sequence blastn 39384 401 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rotundiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;