RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA922890" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 12 ✖

bioproject 1

  • PRJNA922890 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1251877 1251877 PRJNA922890_P_NODE_1_length_9820_cov_28.390114_g0_i0 PRJNA922890 1 9820 28.390114 2787.9091948 Potyvirus 12195 Viruses Viruses 18135 0   NTclustered gi|56407093|ref|NC_002509.2| 12230 g0 i0 100 99.8004073319756 9820 0 100 0 1 9820 9834 15 Turnip mosaic virus, complete genome blastn 980040 18135 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus rapae
3803896 3803896 PRJNA922890_P_NODE_18423_length_445_cov_1.335106_g18013_i0 PRJNA922890 18423 445 1.335106 5.9412217 Paramyxoviridae 11158 Viruses Viruses 822 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g18013 i0 100 69.7977528089888 445 0 100 0 1 445 8124 8568 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 31060 822 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
4727065 4727065 PRJNA922890_P_NODE_71384_length_234_cov_0.884848_g70974_i0 PRJNA922890 71384 234 0.884848 2.07054432 Alphacoronavirus porci 3433789 Viruses Viruses 427 2.9799999999999993e-115   NTclustered gi|1647267686|gb|MH726368.1| 28295 g70974 i0 99.573 100 234 1 100 0 1 234 8339 8572 Porcine epidemic diarrhea virus isolate GDS22, complete genome blastn 23400 427 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Alphacoronavirus Alphacoronavirus porci
6356009 6356009 PRJNA922890_P_NODE_45665_length_288_cov_1.406393_g45255_i0 PRJNA922890 45665 288 1.406393 4.05041184 root 1 Root_unresolved Root_unresolved 527 3.63e-145   NTclustered gi|9790340|ref|NC_001555.1| 12227 g45255 i0 99.653 52.9166666666667 288 1 100 0 1 288 6789 6502 Tobacco etch virus, complete genome blastn 15240 527 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus nicotianainsculpentis
7630027 7630027 PRJNA922890_P_NODE_426_length_2202_cov_3.424285_g365_i0 PRJNA922890 426 2202 3.424285 75.4027557 Orthorubulavirus 2560195 Viruses Viruses 4056 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g365 i0 99.909 67.4940962761126 2202 2 100 0 1 2202 15134 12933 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 148622 4061 0.998768776163507 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
12731434 12731434 PRJNA922890_P_NODE_6150_length_779_cov_1.540845_g5770_i0 PRJNA922890 6150 779 1.540845 12.00318255 Orthorubulavirus 2560195 Viruses Viruses 1439 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g5770 i0 100 68.2785622593068 779 0 100 0 1 779 11930 12708 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 53189 1439 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
13652317 13652317 PRJNA922890_P_NODE_74731_length_232_cov_1.128834_g74321_i0 PRJNA922890 74731 232 1.128834 2.61889488 Tiger orthorubulavirus 3028512 Viruses Viruses 385 1.7999999999999996e-102   NTclustered gi|2465104481|gb|OQ236149.1| 3028512 g74321 i0 96.943 81.8879310344828 229 7 99 0 1 229 2132 2360 MAG: Tiger orthorubulavirus isolate PMV/GD/ZAK2044/2021 genomic sequence blastn 18998 385 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Tiger orthorubulavirus
14005879 14005879 PRJNA922890_P_NODE_11931_length_555_cov_2.419753_g11525_i0 PRJNA922890 11931 555 2.419753 13.42962915 Betacoronavirus 694002 Viruses Viruses 968 0   NTclustered gi|2708442426|gb|PP526174.1| 11138 g11525 i0 98.195 86.4378378378378 554 10 99 0 2 555 31499 30946 Murine hepatitis virus strain JHM, complete genome blastn 47973 968 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus muris
15279842 15279842 PRJNA922890_P_NODE_12_length_6501_cov_71.186723_g8_i0 PRJNA922890 12 6501 71.186723 4627.84886223 Orthorubulavirus 2560195 Viruses Viruses 11939 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g8 i0 99.815 74.3777880326104 6501 12 100 0 1 6501 6539 39 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 483530 11980 0.996577629382304 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
19103481 19103481 PRJNA922890_P_NODE_755_length_1840_cov_14.441558_g663_i0 PRJNA922890 755 1840 14.441558 265.7246672 Orthorubulavirus 2560195 Viruses Viruses 3387 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g663 i0 99.891 82.8451086956522 1840 2 100 0 1 1840 8340 6501 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 152435 3393 0.998231653404067 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
20025384 20025384 PRJNA922890_P_NODE_77856_length_231_cov_0.888889_g77446_i0 PRJNA922890 77856 231 0.888889 2.05333359 Cardiovirus rueckerti 3427730 Viruses Viruses 427 2.9399999999999998e-115   NTclustered gi|570932740|gb|KF836390.1| 12104 g77446 i0 100 100 231 0 100 0 1 231 434 664 Encephalomyocarditis virus isolate YY13, complete genome blastn 23100 427 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Cardiovirus Cardiovirus rueckerti
20378229 20378229 PRJNA922890_P_NODE_42676_length_297_cov_2.210526_g42266_i0 PRJNA922890 42676 297 2.210526 6.56526222 Paramyxoviridae 11158 Viruses Viruses 544 3.7299999999999996e-150   NTclustered gi|2721617856|gb|PP711545.1| 251774 g42266 i0 99.663 68.1212121212121 297 1 100 0 1 297 9410 9706 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 20232 549 0.990892531876138 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;