RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA917598" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA917598 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3447628 3447628 PRJNA917598_P_NODE_71983_length_268_cov_1.184615_g71039_i0 PRJNA917598 71983 268 1.184615 3.1747682 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.002   NTclustered gi|2912987826|dbj|AP039592.1| 145626 g71039 i0 96.97 6.00746268656716 33 1 12 0 207 239 71606584 71606552 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 11, sequence blastn 1610 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
7275417 7275417 PRJNA917598_P_NODE_93006_length_243_cov_0.905882_g92062_i0 PRJNA917598 93006 243 0.905882 2.20129326 Octopus sinensis 2607531 Mollusca Mollusca 171 5.8e-38   NTclustered gi|1914635422|ref|XM_029791310.2| 2607531 g92062 i0 80.804 5.05349794238683 224 37 91 6 5 225 394 614 PREDICTED: Octopus sinensis 40S ribosomal protein S15 (LOC115221095), mRNA blastn 1228 171 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis
21299288 21299288 PRJNA917598_P_NODE_96257_length_241_cov_0.886905_g95313_i0 PRJNA917598 96257 241 0.886905 2.13744105 Physella acuta 109671 Mollusca Mollusca 270 5.499999999999999e-68   NTclustered gi|2572364099|ref|XR_009387799.1| 109671 g95313 i0 87.607 45.4564315352697 234 27 97 2 7 239 189 421 PREDICTED: Physella acuta uncharacterized LOC131946826 (LOC131946826), ncRNA blastn 10955 270 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;