RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA917598" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA917598 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7275127 7275127 PRJNA917598_P_NODE_79246_length_251_cov_1.629213_g78302_i0 PRJNA917598 79246 251 1.629213 4.08932463 Mitovirus sp. 2587224 Viruses Viruses 342 1.21e-89   NTclustered gi|2694901585|gb|OR799111.1| 2587224 g78302 i0 91.235 1.84860557768924 251 22 100 0 1 251 2340 2590 MAG: Mitovirus sp. isolate SKQZS15/13 genomic sequence blastn 464 342 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
18747420 18747420 PRJNA917598_P_NODE_34615_length_390_cov_1.943218_g33671_i0 PRJNA917598 34615 390 1.943218 7.5785502 Monilinia fructicola mitovirus 12 2964645 Viruses Viruses 54.7 0.01   NTclustered gi|2273758211|gb|ON038386.1| 2964645 g33671 i0 96.97 0.156410256410256 33 0 8 1 16 48 1520 1489 Monilinia fructicola mitovirus 12 RNA-dependent RNA polymerase gene, complete cds blastn 61 54.7 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Monilinia fructicola mitovirus 12

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;