RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA917598" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA917598 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
895458 895458 PRJNA917598_P_NODE_22401_length_490_cov_1.364508_g21459_i0 PRJNA917598 22401 490 1.364508 6.6860892 Heterostelium album 2086695 Evosea other_Eukaryota 267 1.57e-66   NTclustered gi|1160559904|ref|XM_020578056.1| 670386 g21459 i0 77.679 72.6387755102041 448 93 90 6 6 448 461 16 Polysphondylium pallidum PN500 heat shock protein Hsp90 family protein (hspD), partial mRNA blastn 35593 267 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
9824443 9824443 PRJNA917598_P_NODE_65528_length_281_cov_1.110577_g64584_i0 PRJNA917598 65528 281 1.110577 3.12072137 Didymium iridis 5793 Evosea other_Eukaryota 270 6.569999999999999e-68   NTclustered gi|2687|emb|X60210.1| 5793 g64584 i0 90 13.8042704626335 210 20 74 1 1 209 5054 5263 D.iridis LSU rRNA gene blastn 3879 270 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
19102946 19102946 PRJNA917598_P_NODE_57895_length_298_cov_1.026667_g56951_i0 PRJNA917598 57895 298 1.026667 3.05946766 Didymium 5792 Evosea other_Eukaryota 472 1.7899999999999998e-128   NTclustered gi|116010577|emb|AM407422.1| 289979 g56951 i0 95.876 68.755033557047 291 12 98 0 1 291 1140 1430 Didymium dubium partial 26S rRNA gene, isolate K7 blastn 20489 472 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium dubium
20023630 20023630 PRJNA917598_P_NODE_80036_length_251_cov_0.865169_g79092_i0 PRJNA917598 80036 251 0.865169 2.17157419 Heterostelium pallidum 13642 Evosea other_Eukaryota 270 5.77e-68   NTclustered gi|160688721|gb|EU275726.1| 13642 g79092 i0 86.29 90.3665338645418 248 34 99 0 1 248 9193 9440 Polysphondylium pallidum strain PN500 mitochondrion, complete genome blastn 22682 270 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium pallidum
21298514 21298514 PRJNA917598_P_NODE_61537_length_288_cov_1.432558_g60593_i0 PRJNA917598 61537 288 1.432558 4.12576704 Polyschismium peyerimhoffii 2911783 Evosea other_Eukaryota 270 6.76e-68   NTclustered gi|2161226355|gb|MZ313553.1| 2911783 g60593 i0 83.775 42.25 302 31 100 16 1 288 6652 6949 Polyschismium peyerimhoffii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12168 270 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Polyschismium Polyschismium peyerimhoffii
23847883 23847883 PRJNA917598_P_NODE_25399_length_459_cov_1.217617_g24456_i0 PRJNA917598 25399 459 1.217617 5.58886203 Didymium minus 289986 Evosea other_Eukaryota 791 0   NTclustered gi|2317681409|gb|OP650776.1| 289986 g24456 i0 97.821 97.8932461873638 459 8 100 2 1 459 303 759 Didymium minus strain MA-Fungi 42163 small subunit ribosomal RNA gene, partial sequence blastn 44933 791 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium minus
25478023 25478023 PRJNA917598_P_NODE_5020_length_1098_cov_2.903415_g4342_i0 PRJNA917598 5020 1098 2.903415 31.8794967 Stemonitidae 137615 Evosea other_Eukaryota 1236 0   NTclustered gi|358628247|gb|JQ031984.1| 142791 g4342 i0 87.085 91.5273224043716 1115 116 100 18 1 1098 1160 57 Lamproderma ovoideum voucher AK06022 18S ribosomal RNA gene, partial sequence blastn 100497 1236 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Lamproderma Lamproderma ovoideum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;