RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA917598" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA917598 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2170644 2170644 PRJNA917598_P_NODE_1182_length_2288_cov_291.512415_g955_i0 PRJNA917598 1182 2288 291.512415 6669.8040552 Betacystovirus phi12 3427160 Viruses Viruses 4004 0   NTclustered gi|22855216|ref|NC_004174.1| 161736 g955 i0 98.252 1 2288 40 100 0 1 2288 14 2301 Pseudomonas phage phi12 segment S, complete sequence blastn 2288 4004 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Betacystovirus Betacystovirus phi12
9824927 9824927 PRJNA917598_P_NODE_88_length_6731_cov_27.772755_g67_i0 PRJNA917598 88 6731 27.772755 1869.38413905 Betacystovirus phi12 3427160 Viruses Viruses 6455 0   NTclustered gi|22855209|ref|NC_004173.1| 161736 g67 i0 84.001 1.00103996434408 6738 1061 100 15 1 6731 15 6742 Pseudomonas phage phi12 segment L, complete sequence blastn 6738 6455 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Betacystovirus Betacystovirus phi12
22572819 22572819 PRJNA917598_P_NODE_318_length_4070_cov_82.526645_g247_i0 PRJNA917598 318 4070 82.526645 3358.8344515 Betacystovirus phi12 3427160 Viruses Viruses 6625 0   NTclustered gi|22855221|ref|NC_004175.1| 161736 g247 i0 96.045 1.0002457002457 4071 160 100 1 1 4070 20 4090 Pseudomonas phage phi12 segment M, complete sequence blastn 4071 6625 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Betacystovirus Betacystovirus phi12

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;