RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA917598" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA917598 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8548570 8548570 PRJNA917598_P_NODE_27067_length_444_cov_1.070081_g26123_i0 PRJNA917598 27067 444 1.070081 4.75115964 Catablema vesicarium 1732519 Cnidaria other_Eukaryota 281 5.03e-71   NTclustered gi|952952498|gb|KT809324.1| 1732519 g26123 i0 80.506 86.1554054054054 395 54 86 20 4 386 6673 6290 Catablema vesicarium mitochondrion, partial genome blastn 38253 281 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Pandeidae Catablema Catablema vesicarium
8550052 8550052 PRJNA917598_P_NODE_86887_length_246_cov_3.092486_g85943_i0 PRJNA917598 86887 246 3.092486 7.60751556 Acropora millepora 45264 Cnidaria other_Eukaryota 52.8 0.022   NTclustered gi|2114135399|ref|XM_029355121.2| 45264 g85943 i0 100 0.341463414634146 28 0 11 0 17 44 578 605 PREDICTED: Acropora millepora uncharacterized LOC114974984 (LOC114974984), mRNA blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;