RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA917598" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA917598 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
896935 896935 PRJNA917598_P_NODE_80601_length_251_cov_0.865169_g79657_i0 PRJNA917598 80601 251 0.865169 2.17157419 Fimicolochytrium jonesii 1396493 Fungi Fungi 169 2.1599999999999996e-37   NTclustered gi|2432057423|ref|XM_053069416.1| 1396493 g79657 i0 79.583 82.4183266932271 240 45 95 3 14 251 880 643 Fimicolochytrium jonesii hsp71-like protein (EV422DRAFT_516945), mRNA blastn 20687 169 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
25122831 25122831 PRJNA917598_P_NODE_72560_length_266_cov_2.808290_g71616_i0 PRJNA917598 72560 266 2.80829 7.4700514 Synchytrium microbalum 1806994 Fungi Fungi 193 1.37e-44   NTclustered gi|1759141776|ref|XM_031166210.1| 1806994 g71616 i0 82.018 85.6541353383459 228 39 85 2 1 227 79 305 Synchytrium microbalum uncharacterized protein (SmJEL517_g00280), partial mRNA blastn 22784 193 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;