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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA917598" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA917598 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2527224 2527224 PRJNA917598_P_NODE_66782_length_278_cov_1.502439_g65838_i0 PRJNA917598 66782 278 1.502439 4.17678042 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 93.5 1.51e-14   NTclustered gi|220983369|dbj|AB453005.1| 29199 g65838 i0 90.141 8.96043165467626 71 7 26 0 1 71 3024 3094 Chlorarachnion reptans gene for nuclear large subunit ribosomal RNA, partial sequence blastn 2491 93.5 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Chlorarachnion Chlorarachnion reptans
8549706 8549706 PRJNA917598_P_NODE_71567_length_269_cov_1.081633_g70623_i0 PRJNA917598 71567 269 1.081633 2.90959277 Thaumatomonas sp. TMT002 407209 SAR_Eukaryotes SAR_Eukaryotes 272 1.74e-68   NTclustered gi|116222248|gb|DQ980510.1| 407209 g70623 i0 85.659 95.9144981412639 258 37 96 0 1 258 109 366 Thaumatomonas sp. TMT002 alpha tubulin gene, partial cds blastn 25801 272 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas sp. TMT002
14923259 14923259 PRJNA917598_P_NODE_14032_length_630_cov_1.062837_g13099_i0 PRJNA917598 14032 630 1.062837 6.6958731 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 278 9.48e-70   NTclustered gi|300676723|gb|GQ377712.1| 323453 g13099 i0 78.846 13.4619047619048 416 85 66 3 1 415 423 10 Heteromita sp. PRA-74 elongation factor 2 (ef2) mRNA, partial cds blastn 8481 278 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
16198558 16198558 PRJNA917598_P_NODE_29093_length_426_cov_3.059490_g28149_i0 PRJNA917598 29093 426 3.05949 13.0334274 Rosculus hawesi 2231161 SAR_Eukaryotes SAR_Eukaryotes 776 0   NTclustered gi|1402550477|gb|MH488763.1| 2231161 g28149 i0 99.531 11.1384976525822 426 2 100 0 1 426 26 451 Rosculus hawesi isolate C1C small subunit ribosomal RNA gene, partial sequence blastn 4745 776 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus hawesi
16199878 16199878 PRJNA917598_P_NODE_80213_length_251_cov_0.865169_g79269_i0 PRJNA917598 80213 251 0.865169 2.17157419 Cercomonas sp. HFCC53 458867 SAR_Eukaryotes SAR_Eukaryotes 459 1.1499999999999996e-124   NTclustered gi|161015705|gb|EF681939.1| 458867 g79269 i0 99.602 11.0557768924303 251 1 100 0 1 251 253 503 Cercomonas sp. HFCC53 28S ribosomal RNA gene, partial sequence blastn 2775 459 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC53
17474228 17474228 PRJNA917598_P_NODE_41914_length_354_cov_4.533808_g40970_i0 PRJNA917598 41914 354 4.533808 16.04968032 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 387 8.08e-103   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g40970 i0 86.761 61.3841807909604 355 37 99 10 1 350 3659 4008 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 21730 387 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;