RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA917598" and tax_phylum = "Candidatus Peregrinibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Peregrinibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA917598 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17473714 17473714 PRJNA917598_P_NODE_22594_length_488_cov_1.484337_g21652_i0 PRJNA917598 22594 488 1.484337 7.24356456 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 243 2.63e-59   NTclustered gi|2258833497|gb|CP060226.1| 2053688 g21652 i0 75.967 1.30327868852459 491 106 99 9 3 487 759675 759191 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome blastn 636 243 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
21299260 21299260 PRJNA917598_P_NODE_95017_length_241_cov_1.452381_g94073_i0 PRJNA917598 95017 241 1.452381 3.50023821 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 261 3.31e-65   NTclustered gi|2258832001|gb|CP060225.1| 2053688 g94073 i0 89.1 88.9460580912863 211 21 87 2 32 241 626061 625852 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-9 chromosome, complete genome blastn 21436 261 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;