RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA917598" and tax_phylum = "Candidatus Absconditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Absconditibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA917598 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13650583 13650583 PRJNA917598_P_NODE_8031_length_846_cov_2.915912_g7202_i0 PRJNA917598 8031 846 2.915912 24.66861552 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 617 6.699999999999999e-172   NTclustered gi|563351663|gb|CP006913.1| 1394709 g7202 i0 80.665 55.2186761229314 812 143 95 11 18 822 126282 125478 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 46715 617 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
21297551 21297551 PRJNA917598_P_NODE_23737_length_475_cov_2.457711_g22795_i0 PRJNA917598 23737 475 2.457711 11.67412725 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 171 1.22e-37   NTclustered gi|563351663|gb|CP006913.1| 1394709 g22795 i0 80.408 39.4273684210526 245 31 50 15 121 359 125036 125269 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 18728 171 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
25121477 25121477 PRJNA917598_P_NODE_17720_length_556_cov_2.045549_g16785_i0 PRJNA917598 17720 556 2.045549 11.37325244 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 316 1.76e-81   NTclustered gi|563351663|gb|CP006913.1| 1394709 g16785 i0 85.526 62.8507194244604 304 42 54 2 255 556 126539 126842 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 34945 316 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;