RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA917598" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA917598 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4724275 4724275 PRJNA917598_P_NODE_30944_length_414_cov_1.351906_g30000_i0 PRJNA917598 30944 414 1.351906 5.59689084 Blastocladiella sp. 2169676 Fungi Fungi 364 4.4999999999999985e-96   NTclustered gi|1976519919|gb|MN873040.1| 2169676 g30000 i0 84.539 16.1135265700483 401 26 92 17 2 382 10643 10259 Blastocladiella sp. mitochondrion, complete genome blastn 6671 364 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella sp.
12374467 12374467 PRJNA917598_P_NODE_14610_length_617_cov_1.332721_g13676_i0 PRJNA917598 14610 617 1.332721 8.22288857 Blastocladiella emersonii 4808 Fungi Fungi 462 2.38e-125   NTclustered gi|209427640|ref|NC_011360.1| 4808 g13676 i0 81.18 2.48946515397083 627 73 99 34 1 613 33922 33327 Blastocladiella emersonii mitochondrion, complete genome blastn 1536 462 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
16198924 16198924 PRJNA917598_P_NODE_43013_length_350_cov_1.631769_g42069_i0 PRJNA917598 43013 350 1.631769 5.7111915 Blastocladiella sp. 2169676 Fungi Fungi 122 2.4799999999999994e-23   NTclustered gi|1976519919|gb|MN873040.1| 2169676 g42069 i0 97.222 0.72 72 2 21 0 214 285 22969 22898 Blastocladiella sp. mitochondrion, complete genome blastn 252 122 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella sp.
17475276 17475276 PRJNA917598_P_NODE_85534_length_247_cov_1.672414_g84590_i0 PRJNA917598 85534 247 1.672414 4.13086258 Blastocladiella emersonii 4808 Fungi Fungi 243 1.23e-59   NTclustered gi|209427640|ref|NC_011360.1| 4808 g84590 i0 89.894 91.6842105263158 188 19 76 0 1 188 6276 6463 Blastocladiella emersonii mitochondrion, complete genome blastn 22646 243 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;