RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA917598" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA917598 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10180205 10180205 PRJNA917598_P_NODE_6888_length_920_cov_3.736718_g6114_i0 PRJNA917598 6888 920 3.736718 34.3778056 Capsulimonas 2494209 Bacteria Bacteria 468 7.790000000000001e-127   NTclustered gi|2874253701|emb|OY969427.1| 157466 g6114 i0 84.615 290.632608695652 481 63 52 7 3 480 3408694 3408222 MAG: uncultured Armatimonadetes bacterium isolate MFD09671.bin.1.19 genome assembly, chromosome: 1 blastn 267382 468 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
12375477 12375477 PRJNA917598_P_NODE_54730_length_308_cov_1.821277_g53786_i0 PRJNA917598 54730 308 1.821277 5.60953316 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 128 4.64e-25   NTclustered gi|663071213|gb|CP007139.1| 661478 g53786 i0 86.842 0.37012987012987 114 15 37 0 193 306 1625755 1625868 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 114 128 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
12375721 12375721 PRJNA917598_P_NODE_64750_length_282_cov_1.473684_g63806_i0 PRJNA917598 64750 282 1.473684 4.15578888 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 381 2.919999999999999e-101   NTclustered gi|2076449834|gb|CP075365.1| 2682144 g63806 i0 91.103 287.890070921986 281 25 99 0 2 282 1879368 1879648 MAG: Fimbriimonadaceae bacterium isolate ACE_ARM2 chromosome blastn 81185 381 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
13650248 13650248 PRJNA917598_P_NODE_66831_length_278_cov_1.497561_g65887_i0 PRJNA917598 66831 278 1.497561 4.16321958 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 248 3.0399999999999997e-61   NTclustered gi|2874254000|emb|OY970325.1| 157466 g65887 i0 84.585 289.161870503597 253 36 90 3 28 277 1304760 1304508 MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 blastn 80387 248 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
14005074 14005074 PRJNA917598_P_NODE_12391_length_673_cov_3.160000_g11470_i0 PRJNA917598 12391 673 3.16 21.2668 Fimbriimonas 1005038 Bacteria Bacteria 883 0   NTclustered gi|663071213|gb|CP007139.1| 661478 g11470 i0 90.909 218.887072808321 660 57 98 2 1 659 28905 28248 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 147311 883 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
16198590 16198590 PRJNA917598_P_NODE_30313_length_418_cov_1.594203_g29369_i0 PRJNA917598 30313 418 1.594203 6.66376854 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 484 3.3499999999999995e-132   NTclustered gi|2076447151|gb|CP075366.1| 2682144 g29369 i0 87.952 25.1196172248804 415 44 99 6 1 412 894316 894727 MAG: Fimbriimonadaceae bacterium isolate ACE_ARM8 chromosome blastn 10500 484 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;