RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA917598" and tax_clade = "Methanomada group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 4 ✖

bioproject 1

  • PRJNA917598 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
895489 895489 PRJNA917598_P_NODE_23801_length_475_cov_0.950249_g22859_i0 PRJNA917598 23801 475 0.950249 4.51368275 Methanosphaera sp. ISO3-F5 1452353 Archaea Archaea 878 0   NTclustered gi|2695672494|gb|CP118753.2| 1452353 g22859 i0 100 49.5073684210526 475 0 100 0 1 475 852620 853094 Methanosphaera sp. ISO3-F5 chromosome, complete genome blastn 23516 878 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp. ISO3-F5
2171408 2171408 PRJNA917598_P_NODE_41622_length_356_cov_1.088339_g40678_i0 PRJNA917598 41622 356 1.088339 3.87448684 Methanosphaera sp. ISO3-F5 1452353 Archaea Archaea 658 0   NTclustered gi|2695672494|gb|CP118753.2| 1452353 g40678 i0 100 21.1685393258427 356 0 100 0 1 356 2230648 2230293 Methanosphaera sp. ISO3-F5 chromosome, complete genome blastn 7536 658 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp. ISO3-F5
18748659 18748659 PRJNA917598_P_NODE_8455_length_825_cov_9.295213_g7610_i0 PRJNA917598 8455 825 9.295213 76.68550725 Methanosphaera sp. ISO3-F5 1452353 Archaea Archaea 1498 0   NTclustered gi|2695672494|gb|CP118753.2| 1452353 g7610 i0 100 148.814545454545 811 0 98 0 1 811 394133 393323 Methanosphaera sp. ISO3-F5 chromosome, complete genome blastn 122772 1498 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp. ISO3-F5
23848523 23848523 PRJNA917598_P_NODE_50439_length_322_cov_3.871486_g49495_i0 PRJNA917598 50439 322 3.871486 12.46618492 Methanosphaera sp. ISO3-F5 1452353 Archaea Archaea 595 1.1099999999999995e-165   NTclustered gi|575790353|gb|KF697734.1| 1452353 g49495 i0 100 102.860248447205 322 0 100 0 1 322 10 331 Methanosphaera sp. ISO3-F5 16S ribosomal RNA gene, partial sequence blastn 33121 595 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp. ISO3-F5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;