contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA915212" and tax_phylum = "Nematoda"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3803052 | 3803052 | PRJNA915212_P_NODE_15183_length_155_cov_3.245283_g15145_i0 | PRJNA915212 | 15183 | 155 | 3.245283 | 5.03018865 | Metazoa | 33208 | Nematoda | Nematoda | 67.6 | 4.55e-7 | NTclustered | gi|1734332180|ref|NM_001268834.2| | 6239 | g15145 | i0 | 90.566 | 2.63225806451613 | 53 | 1 | 33 | 3 | 54 | 104 | 68 | 18 | Caenorhabditis elegans 60S ribosomal protein L29 (rpl-29), mRNA | blastn | 408 | 67.6 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis elegans | |
| 7273407 | 7273407 | PRJNA915212_P_NODE_7346_length_216_cov_0.910180_g7308_i0 | PRJNA915212 | 7346 | 216 | 0.91018 | 1.9659888 | Caenorhabditis elegans | 6239 | Nematoda | Nematoda | 158 | 3.93e-34 | NTclustered | gi|1972263330|ref|NM_065710.8| | 6239 | g7308 | i0 | 84.242 | 4.625 | 165 | 22 | 75 | 4 | 1 | 163 | 741 | 579 | Caenorhabditis elegans ATP synthase subunit beta, mitochondrial (atp-2), mRNA | blastn | 999 | 158 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis elegans | |
| 7629123 | 7629123 | PRJNA915212_P_NODE_1506_length_543_cov_2.860324_g1471_i0 | PRJNA915212 | 1506 | 543 | 2.860324 | 15.53155932 | Opisthokonta | 33154 | Nematoda | Nematoda | 348 | 6.08e-91 | NTclustered | gi|150984497|gb|EF634891.1| | 358044 | g1471 | i0 | 82.776 | 69.1915285451197 | 389 | 67 | 72 | 0 | 85 | 473 | 47 | 435 | Koerneria sp. RS1982 small subunit ribosomal protein 14 (rps-14) mRNA, partial cds | blastn | 37571 | 350 | 0.994285714285714 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Koerneria | Koerneria sp. RS1982 | |
| 12374296 | 12374296 | PRJNA915212_P_NODE_3290_length_347_cov_4.187919_g3253_i0 | PRJNA915212 | 3290 | 347 | 4.187919 | 14.53207893 | Pristionchus hoplostomus | 1355913 | Nematoda | Nematoda | 161 | 5.23e-35 | NTclustered | gi|524845312|gb|KC819366.1| | 1355913 | g3253 | i0 | 80.717 | 30.5561959654179 | 223 | 29 | 62 | 11 | 65 | 280 | 264 | 49 | Pristionchus hoplostomus strain JU1090 subunit ribosomal protein 20 (rps-20) mRNA, partial cds | blastn | 10603 | 161 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus hoplostomus | |
| 13648703 | 13648703 | PRJNA915212_P_NODE_10531_length_177_cov_1.710938_g10493_i0 | PRJNA915212 | 10531 | 177 | 1.710938 | 3.02836026 | Pristionchus sp. 13 RS5231 | 452807 | Nematoda | Nematoda | 121 | 4.039999999999999e-23 | NTclustered | gi|150981877|gb|EF634508.1| | 452807 | g10493 | i0 | 79.31 | 12.6497175141243 | 174 | 34 | 98 | 2 | 5 | 177 | 265 | 93 | Pristionchus sp. 13 RS5231 large subunit ribosomal protein 1 (rpl-1) mRNA, partial cds | blastn | 2239 | 121 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus sp. 13 RS5231 | |
| 18746704 | 18746704 | PRJNA915212_P_NODE_15135_length_160_cov_2.297297_g15097_i0 | PRJNA915212 | 15135 | 160 | 2.297297 | 3.6756752 | Strongyloides ratti | 34506 | Nematoda | Nematoda | 169 | 1.26e-37 | NTclustered | gi|1376151079|ref|XM_024644001.1| | 34506 | g15097 | i0 | 85.987 | 162.275 | 157 | 22 | 98 | 0 | 1 | 157 | 2 | 158 | Strongyloides ratti Ubiquitin-60S ribosomal protein L40 (SRAE_2000504200), partial mRNA | blastn | 25964 | 169 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides ratti | |
| 18746734 | 18746734 | PRJNA915212_P_NODE_3315_length_346_cov_2.138047_g3278_i0 | PRJNA915212 | 3315 | 346 | 2.138047 | 7.39764262 | Levipalatum texanum | 1486449 | Nematoda | Nematoda | 200 | 1.11e-46 | NTclustered | gi|610559467|gb|KJ395558.1| | 1486449 | g3278 | i0 | 82.158 | 3.03179190751445 | 241 | 35 | 68 | 6 | 56 | 292 | 384 | 148 | Levipalatum texanum ribosomal protein (rpl-23) gene, partial cds | blastn | 1049 | 200 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Diplogasteridae | Levipalatum | Levipalatum texanum | |
| 22572171 | 22572171 | PRJNA915212_P_NODE_10078_length_182_cov_1.533835_g10040_i0 | PRJNA915212 | 10078 | 182 | 1.533835 | 2.7915797 | Acrostichus sp. RS5083 | 669107 | Nematoda | Nematoda | 183 | 5.259999999999998e-42 | NTclustered | gi|256709251|gb|GQ422278.1| | 669107 | g10040 | i0 | 89.189 | 52.7252747252747 | 148 | 14 | 81 | 2 | 36 | 182 | 22 | 168 | Acrostichus sp. RS5083 small subunit ribosomal protein 14 (rps-14) mRNA, partial cds | blastn | 9596 | 183 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Diplogasteridae | Acrostichus | Acrostichus sp. RS5083 | |
| 22572219 | 22572219 | PRJNA915212_P_NODE_3758_length_318_cov_1.736059_g3720_i0 | PRJNA915212 | 3758 | 318 | 1.736059 | 5.52066762 | Diplogastrellus gracilis | 669117 | Nematoda | Nematoda | 187 | 7.83e-43 | NTclustered | gi|256709130|gb|GQ422217.1| | 669117 | g3720 | i0 | 80.816 | 70.374213836478 | 245 | 41 | 76 | 5 | 74 | 315 | 723 | 482 | Diplogastrellus gracilis large subunit ribosomal protein 2 (rpl-2) mRNA, partial cds | blastn | 22379 | 187 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Diplogasteridae | Diplogastrellus | Diplogastrellus gracilis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;