RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA915212" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA915212 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2170594 2170594 PRJNA915212_P_NODE_9522_length_188_cov_1.467626_g9484_i0 PRJNA915212 9522 188 1.467626 2.75913688 Synstelium polycarpum 361085 Evosea other_Eukaryota 113 7.290000000000001e-21   NTclustered gi|1057487789|gb|KX539455.1| 361085 g9484 i0 85.849 34.968085106383 106 15 56 0 79 184 1901 1796 Dictyostelium polycarpum strain OhioWILDS phosphoenolpyruvate carboxykinase (gtp) gene, complete cds blastn 6574 113 1 Eukaryota Amoebozoa   Evosea Eumycetozoa     Synstelium Synstelium polycarpum
5079332 5079332 PRJNA915212_P_NODE_9064_length_193_cov_1.416667_g9026_i0 PRJNA915212 9064 193 1.416667 2.73416731 Dictyostelium 5782 Evosea other_Eukaryota 183 5.6499999999999996e-42   NTclustered gi|167787|gb|M26017.1|DDIEF2 44689 g9026 i0 85 4.88082901554404 180 27 93 0 1 180 1770 1591 D.discoideum elongation factor 2 mRNA, complete cds blastn 942 183 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
7273394 7273394 PRJNA915212_P_NODE_5806_length_245_cov_1.561224_g5768_i0 PRJNA915212 5806 245 1.561224 3.8249988 Acytostelium subglobosum 361139 Evosea other_Eukaryota 132 2.76e-26   NTclustered gi|831792467|ref|XM_012904599.1| 1410327 g5768 i0 80.702 16.0897959183673 171 31 69 2 42 211 344 513 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 3942 132 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
8903862 8903862 PRJNA915212_P_NODE_11187_length_171_cov_1.254098_g11149_i0 PRJNA915212 11187 171 1.254098 2.14450758 Eumycetozoa 142796 Evosea other_Eukaryota 122 1.0799999999999999e-23   NTclustered gi|330844028|ref|XM_003293893.1| 5786 g11149 i0 80.745 28.812865497076 161 27 93 4 12 170 316 474 Dictyostelium purpureum S-adenosylmethionine synthetase (DICPUDRAFT_51206), mRNA blastn 4927 122 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
12374337 12374337 PRJNA915212_P_NODE_9390_length_189_cov_2.300000_g9352_i0 PRJNA915212 9390 189 2.3 4.347 Acytostelium subglobosum 361139 Evosea other_Eukaryota 87.9 4.45e-13   NTclustered gi|831788452|ref|XM_012903297.1| 1410327 g9352 i0 79.688 0.677248677248677 128 20 66 5 65 189 1907 1783 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 128 87.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
17473313 17473313 PRJNA915212_P_NODE_13914_length_163_cov_0.894737_g13876_i0 PRJNA915212 13914 163 0.894737 1.45842131 Mastigamoeba balamuthi 108607 Evosea other_Eukaryota 95.3 2.23e-15   NTclustered gi|148536468|gb|EF410004.1| 108607 g13876 i0 87.805 1.48466257668712 82 8 50 2 1 81 1572 1492 Mastigamoeba balamuthi chaperonin 60 (Cpn60) mRNA, complete cds blastn 242 95.3 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Mastigamoebidae Mastigamoeba Mastigamoeba balamuthi
17828566 17828566 PRJNA915212_P_NODE_8174_length_204_cov_0.987097_g8136_i0 PRJNA915212 8174 204 0.987097 2.01367788 Eumycetozoa 142796 Evosea other_Eukaryota 272 1.25e-68   NTclustered gi|426281754|gb|JX681130.1| 289989 g8136 i0 91.045 98.5343137254902 201 18 99 0 4 204 806 606 Didymium squamulosum actin gene, partial cds blastn 20101 272 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium squamulosum
18746718 18746718 PRJNA915212_P_NODE_2515_length_410_cov_1.576177_g2479_i0 PRJNA915212 2515 410 1.576177 6.4623257 Acytostelium subglobosum 361139 Evosea other_Eukaryota 263 1.67e-65   NTclustered gi|831769224|ref|XM_012897186.1| 1410327 g2479 i0 78.624 2.59756097560976 407 80 98 5 9 410 85 489 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 1065 263 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
21297095 21297095 PRJNA915212_P_NODE_12617_length_165_cov_1.353448_g12579_i0 PRJNA915212 12617 165 1.353448 2.2331892 Acytostelium subglobosum 361139 Evosea other_Eukaryota 76.8 8.19e-10   NTclustered gi|831762324|ref|XM_012895069.1| 1410327 g12579 i0 77.465 5.03030303030303 142 23 84 7 2 140 496 631 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 830 76.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;