RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA915212" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA915212 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2170576 2170576 PRJNA915212_P_NODE_7022_length_221_cov_0.872093_g6984_i0 PRJNA915212 7022 221 0.872093 1.92732553 Dolichospermum sp. DL01 2717871 Bacteria Bacteria 86.1 1.93e-12   NTclustered gi|2004368895|gb|CP050884.1| 2717871 g6984 i0 94.545 23.3755656108597 55 3 25 0 8 62 712392 712338 MAG: Dolichospermum sp. DL01 chromosome, complete genome blastn 5166 86.1 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Aphanizomenonaceae Dolichospermum Dolichospermum sp. DL01
9823046 9823046 PRJNA915212_P_NODE_4828_length_273_cov_1.584821_g4790_i0 PRJNA915212 4828 273 1.584821 4.32656133 uncultured Chroococcidiopsis sp. 259957 Bacteria Bacteria 364 2.8299999999999993e-96   NTclustered gi|225696191|gb|FJ805858.1| 259957 g4790 i0 90.842 176.032967032967 273 23 99 2 1 272 1832 2103 Uncultured Chroococcidiopsis sp. clone AS1_2 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 48057 364 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis uncultured Chroococcidiopsis sp.
12374258 12374258 PRJNA915212_P_NODE_14470_length_162_cov_0.902655_g14432_i0 PRJNA915212 14470 162 0.902655 1.4623011 uncultured cyanobacterium 1211 Bacteria Bacteria 279 5.68e-71   NTclustered gi|146142255|gb|EF522759.1| 1211 g14432 i0 98.125 98.9753086419753 160 3 99 0 3 162 55 214 Uncultured cyanobacterium clone SCSS058 16S ribosomal RNA gene, partial sequence blastn 16034 279 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         uncultured cyanobacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;