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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA914897" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA914897 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4723404 4723404 PRJNA914897_P_NODE_26324_length_316_cov_0.950617_g25900_i0 PRJNA914897 26324 316 0.950617 3.00394972 uncultured crenarchaeote 29281 Archaea Archaea 518 2.4299999999999998e-142   NTclustered gi|22797874|emb|AJ496176.1| 29281 g25900 i0 96.203 30.8860759493671 316 12 100 0 1 316 6600 6915 Uncultured crenarchaeote 34 kb genomic fragment blastn 9760 518 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
7629094 7629094 PRJNA914897_P_NODE_37926_length_249_cov_0.875000_g37502_i0 PRJNA914897 37926 249 0.875 2.17875 Archaea 2157 Archaea Archaea 460 3.16e-125   NTclustered gi|225382324|gb|FJ790595.1| 29281 g37502 i0 100 100.004016064257 249 0 100 0 1 249 892 1140 Uncultured crenarchaeote clone QA38 16S ribosomal RNA gene, partial sequence blastn 24901 460 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
9822941 9822941 PRJNA914897_P_NODE_7308_length_722_cov_2.605547_g6917_i0 PRJNA914897 7308 722 2.605547 18.81204934 Methanosphaerula palustris 475088 Archaea Archaea 58.4 0.002   NTclustered gi|219544946|gb|CP001338.1| 521011 g6917 i0 97.059 0.0470914127423823 34 1 5 0 673 706 936128 936161 Methanosphaerula palustris E1-9c chromosome, complete genome blastn 34 58.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanosphaerula Methanosphaerula palustris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;