RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA914897" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA914897 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
894830 894830 PRJNA914897_P_NODE_31661_length_279_cov_1.169903_g31237_i0 PRJNA914897 31661 279 1.169903 3.26402937 Corticium candelabrum 121492 Porifera other_Eukaryota 54.7 0.007   NTclustered gi|2664238069|ref|XM_062658998.1| 121492 g31237 i0 94.286 0.125448028673835 35 2 13 0 39 73 1672 1706 PREDICTED: Corticium candelabrum quinone oxidoreductase-like (LOC134190546), mRNA blastn 35 54.7 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum
2170164 2170164 PRJNA914897_P_NODE_14142_length_478_cov_1.251852_g13720_i0 PRJNA914897 14142 478 1.251852 5.98385256 Halichondria panicea 6063 Porifera other_Eukaryota 63.9 2.15e-5   NTclustered gi|2719051566|ref|XM_064533900.1| 6063 g13720 i0 100 0.382845188284519 34 0 7 0 396 429 554 587 PREDICTED: Halichondria panicea inhibitor of nuclear factor kappa-B kinase subunit beta-like (LOC135337885), mRNA blastn 183 63.9 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
25477583 25477583 PRJNA914897_P_NODE_21980_length_356_cov_1.275618_g21556_i0 PRJNA914897 21980 356 1.275618 4.54120008 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 56.5 0.003   NTclustered gi|2746775501|ref|XM_065971606.1| 121494 g21556 i0 100 0.452247191011236 30 0 8 0 13 42 973 1002 PREDICTED: Oscarella lobularis kinesin-like protein KIF28P (LOC136184681), mRNA blastn 161 56.5 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;