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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA914897" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA914897 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
894896 894896 PRJNA914897_P_NODE_37241_length_250_cov_0.870056_g36817_i0 PRJNA914897 37241 250 0.870056 2.17514 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 54.7 0.006   NTclustered gi|2119447510|ref|XM_044697578.1| 51637 g36817 i0 96.875 0.128 32 1 13 0 112 143 443 412 Naegleria lovaniensis uncharacterized protein (C9374_007596), partial mRNA blastn 32 54.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
2526610 2526610 PRJNA914897_P_NODE_16962_length_422_cov_2.111748_g16540_i0 PRJNA914897 16962 422 2.111748 8.91157656 Naegleria 5761 Heterolobosea other_Eukaryota 780 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g16540 i0 100 62.5781990521327 422 0 100 0 1 422 3139 3560 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 26408 780 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
4723462 4723462 PRJNA914897_P_NODE_34284_length_263_cov_1.621053_g33860_i0 PRJNA914897 34284 263 1.621053 4.26336939 Acrasis rosea 43695 Heterolobosea other_Eukaryota 261 3.66e-65   NTclustered gi|12083876|gb|AF190771.1|AF190771 43695 g33860 i0 85.098 78.6768060836502 255 38 97 0 7 261 1081 827 Acrasis rosea elongation factor 1 alpha (tef1) gene, partial cds blastn 20692 261 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis rosea
13648387 13648387 PRJNA914897_P_NODE_13351_length_496_cov_1.728132_g12929_i0 PRJNA914897 13351 496 1.728132 8.57153472 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 65.8 6.22e-6   NTclustered gi|2119447976|ref|XM_044697711.1| 51637 g12929 i0 90.196 0.102822580645161 51 3 10 2 417 466 1915 1964 Naegleria lovaniensis uncharacterized protein (C9374_007715), partial mRNA blastn 51 65.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
17473198 17473198 PRJNA914897_P_NODE_41474_length_243_cov_0.905882_g41050_i0 PRJNA914897 41474 243 0.905882 2.20129326 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 363 8.909999999999999e-96   NTclustered gi|290981707|ref|XM_002673526.1| 5762 g41050 i0 95.197 0.94238683127572 229 11 94 0 15 243 296 68 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_71455), partial mRNA blastn 229 363 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20021708 20021708 PRJNA914897_P_NODE_42836_length_241_cov_0.910714_g42412_i0 PRJNA914897 42836 241 0.910714 2.19482074 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 291 4.22e-74   NTclustered gi|290992399|ref|XM_002678776.1| 5762 g42412 i0 88.477 1.00829875518672 243 25 99 1 2 241 1151 909 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_57629), partial mRNA blastn 243 291 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
21653120 21653120 PRJNA914897_P_NODE_10897_length_564_cov_2.050916_g10478_i0 PRJNA914897 10897 564 2.050916 11.56716624 Naegleria 5761 Heterolobosea other_Eukaryota 981 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g10478 i0 98.561 31.4485815602837 556 7 98 1 1 555 3923 4478 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 17737 981 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23847142 23847142 PRJNA914897_P_NODE_25819_length_320_cov_1.246964_g25395_i0 PRJNA914897 25819 320 1.246964 3.9902848 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 508 1.48e-139   NTclustered gi|290971770|ref|XM_002668606.1| 5762 g25395 i0 95.312 4.96875 320 15 100 0 1 320 717 398 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_60075), partial mRNA blastn 1590 508 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23847233 23847233 PRJNA914897_P_NODE_35759_length_255_cov_1.269231_g35335_i0 PRJNA914897 35759 255 1.269231 3.23653905 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 344 3.41e-90   NTclustered gi|290999450|ref|XM_002682247.1| 5762 g35335 i0 91.051 4.0078431372549 257 19 100 3 1 255 64 318 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_35035), partial mRNA blastn 1022 344 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
25121031 25121031 PRJNA914897_P_NODE_37320_length_250_cov_0.870056_g36896_i0 PRJNA914897 37320 250 0.870056 2.17514 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 416 6.969999999999998e-112   NTclustered gi|290985827|ref|XM_002675581.1| 5762 g36896 i0 96.787 3.972 249 8 99 0 2 250 3903 3655 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_80260), partial mRNA blastn 993 416 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
25477612 25477612 PRJNA914897_P_NODE_39220_length_247_cov_0.885057_g38796_i0 PRJNA914897 39220 247 0.885057 2.18609079 Paravahlkampfia 166957 Heterolobosea other_Eukaryota 457 4.05e-124   NTclustered gi|1121487417|gb|KX068999.1| 166958 g38796 i0 100 13.6275303643725 247 0 100 0 1 247 590 836 Paravahlkampfia ustiana strain ST-39 18S ribosomal RNA gene, partial sequence blastn 3366 457 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia ustiana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;