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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA914897" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA914897 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4723306 4723306 PRJNA914897_P_NODE_11784_length_537_cov_1.575431_g11364_i0 PRJNA914897 11784 537 1.575431 8.46006447 Ripella sp. 805 1217113 Discosea other_Eukaryota 817 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g11364 i0 94.569 99.3929236499069 534 19 99 10 7 537 1 527 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 53374 817 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
18746407 18746407 PRJNA914897_P_NODE_18375_length_401_cov_3.731707_g17953_i0 PRJNA914897 18375 401 3.731707 14.96414507 Ripella sp. GP2 1217115 Discosea other_Eukaryota 649 0   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g17953 i0 96.01 89.8154613466334 401 13 99 3 2 401 1073 675 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 36016 649 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
18746440 18746440 PRJNA914897_P_NODE_23215_length_343_cov_1.422222_g22791_i0 PRJNA914897 23215 343 1.422222 4.87822146 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 279 1.37e-70   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g22791 i0 81.556 35.3586005830904 347 56 100 6 1 343 2389 2047 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 12128 279 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20021693 20021693 PRJNA914897_P_NODE_41836_length_242_cov_1.035503_g41412_i0 PRJNA914897 41836 242 1.035503 2.50591726 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 130 9.79e-26   NTclustered gi|470423488|ref|XM_004337555.1| 1257118 g41412 i0 82.051 51.6487603305785 156 24 64 4 85 238 367 520 Acanthamoeba castellanii str. Neff ribosomal protein L23, putative (ACA1_164710), partial mRNA blastn 12499 130 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21296825 21296825 PRJNA914897_P_NODE_24577_length_331_cov_0.887597_g24153_i0 PRJNA914897 24577 331 0.887597 2.93794607 Platyamoeba placida 3454475 Discosea other_Eukaryota 411 4.459999999999999e-110   NTclustered gi|33946348|gb|AY294153.1| 197527 g24153 i0 89.091 100.075528700906 330 36 99 0 1 330 871 542 Platyamoeba placida actin mRNA, partial cds blastn 33125 411 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
23847218 23847218 PRJNA914897_P_NODE_33819_length_266_cov_1.880829_g33395_i0 PRJNA914897 33819 266 1.880829 5.00300514 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 191 4.940000000000001e-44   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g33395 i0 79.924 61.9887218045113 264 49 98 3 3 264 544 283 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 16489 191 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;