RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA914897" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA914897 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11098439 11098439 PRJNA914897_P_NODE_33509_length_268_cov_1.476923_g33085_i0 PRJNA914897 33509 268 1.476923 3.95815364 Polychytrium aggregatum 110093 Fungi Fungi 143 1.42e-29   NTclustered gi|2432132411|ref|XM_053109501.1| 110093 g33085 i0 78.008 6.73134328358209 241 43 88 7 11 246 940 1175 Polychytrium aggregatum ribosomal protein L3-domain-containing protein (BJ171DRAFT_489537), mRNA blastn 1804 143 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
25121026 25121026 PRJNA914897_P_NODE_36600_length_251_cov_0.865169_g36176_i0 PRJNA914897 36600 251 0.865169 2.17157419 Piromyces sp. E2 73868 Fungi Fungi 172 1.67e-38   NTclustered gi|7838276|emb|AJ238887.1| 73868 g36176 i0 80 22.0996015936255 245 40 96 6 2 243 107 345 Piromyces sp. E2 hsp70.2 gene for putative heat shock protein 70, partial blastn 5547 172 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Piromyces Piromyces sp. E2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;