RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA914897" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA914897 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16197895 16197895 PRJNA914897_P_NODE_40553_length_244_cov_1.707602_g40129_i0 PRJNA914897 40553 244 1.707602 4.16654888 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 206 1.6e-48   NTclustered gi|2874253766|emb|OY969711.1| 1672391 g40129 i0 85.572 311.520491803279 201 23 81 5 28 224 240390 240192 MAG: uncultured Chloroflexia bacterium isolate MFD09730.bin.c.1 genome assembly, chromosome: 1 blastn 76011 206 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
25121078 25121078 PRJNA914897_P_NODE_40620_length_244_cov_1.350877_g40196_i0 PRJNA914897 40620 244 1.350877 3.29613988 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 363 8.949999999999999e-96   NTclustered gi|2874253835|emb|OY969885.1| 1672391 g40196 i0 93.443 123.377049180328 244 16 100 0 1 244 2093153 2093396 MAG: uncultured Chloroflexia bacterium isolate MFD01275.bin.c.5 genome assembly, chromosome: 1 blastn 30104 363 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;