RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA914897" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA914897 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2170240 2170240 PRJNA914897_P_NODE_2322_length_1267_cov_2.342546_g2113_i0 PRJNA914897 2322 1267 2.342546 29.68005782 Plasmodium falciparum 5833 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.01   NTclustered gi|296004507|ref|XM_002808629.1| 36329 g2113 i0 97.059 0.026835043409629 34 0 3 1 299 332 6369 6337 Plasmodium falciparum 3D7 conserved Plasmodium protein, unknown function (PF3D7_0504800), partial mRNA blastn 34 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
3445707 3445707 PRJNA914897_P_NODE_2623_length_1208_cov_3.314537_g2401_i0 PRJNA914897 2623 1208 3.314537 40.03960696 Plasmodium chabaudi 5825 SAR_Eukaryotes SAR_Eukaryotes 425 6.31e-114   NTclustered gi|1027959222|ref|XM_734022.2| 31271 g2401 i0 75.026 8.8385761589404 973 215 79 25 8 965 1189 230 Plasmodium chabaudi chabaudi 26S protease regulatory subunit 7, putative (PCHAS_1411900), partial mRNA blastn 10677 425 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
4723415 4723415 PRJNA914897_P_NODE_27364_length_307_cov_2.632479_g26940_i0 PRJNA914897 27364 307 2.632479 8.08171053 Plasmodium falciparum 5833 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|124808337|ref|XM_001348252.1| 36329 g26940 i0 96.97 0.198697068403909 33 1 11 0 271 303 1257 1225 Plasmodium falciparum 3D7 methyltransferase, putative (PF3D7_1411700), partial mRNA blastn 61 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
5998120 5998120 PRJNA914897_P_NODE_26685_length_313_cov_0.950000_g26261_i0 PRJNA914897 26685 313 0.95 2.9735 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|2795619416|ref|XM_068063738.1| 483139 g26261 i0 100 0.0958466453674121 30 0 10 0 225 254 3060 3031 Cystoisospora suis m phase phosphoprotein mpp10 (CSUI_003542), mRNA blastn 30 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
10179569 10179569 PRJNA914897_P_NODE_26428_length_315_cov_1.272727_g26004_i0 PRJNA914897 26428 315 1.272727 4.00909005 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 82.4 3.76e-11   NTclustered gi|67609492|ref|XM_661921.1| 353151 g26004 i0 82 2.02857142857143 100 14 31 3 217 314 1892 1795 Cryptosporidium hominis TU502 hypothetical protein (Chro.60441) partial mRNA blastn 639 82.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium hominis
11098354 11098354 PRJNA914897_P_NODE_22369_length_352_cov_0.992832_g21945_i0 PRJNA914897 22369 352 0.992832 3.49476864 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.033   NTclustered gi|1620141662|ref|XM_028676765.1| 85471 g21945 i0 100 0.0795454545454545 28 0 8 0 86 113 4555 4582 Plasmodium relictum zinc finger protein, putative (PRELSG_0932100), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
12374175 12374175 PRJNA914897_P_NODE_41670_length_242_cov_2.650888_g41246_i0 PRJNA914897 41670 242 2.650888 6.41514896 Babesia bigemina 5866 SAR_Eukaryotes SAR_Eukaryotes 183 7.41e-42   NTclustered gi|833483999|ref|XM_012911664.1| 5866 g41246 i0 83.938 55.2314049586777 193 29 79 2 10 201 234 43 Babesia bigemina 60S ribosomal protein L44 protein, putative partial mRNA blastn 13366 183 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
25120930 25120930 PRJNA914897_P_NODE_22440_length_351_cov_1.089928_g22016_i0 PRJNA914897 22440 351 1.089928 3.82564728 Plasmodium malariae 5858 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.009   NTclustered gi|1624465073|ref|XM_029006112.1| 5858 g22016 i0 92.308 0.911680911680912 39 1 11 2 9 47 202 238 Plasmodium malariae trafficking protein particle complex subunit 6A, putative (PmUG01_11044900), partial mRNA blastn 320 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium malariae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;