RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA914897" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA914897 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
894732 894732 PRJNA914897_P_NODE_18341_length_402_cov_1.395137_g17919_i0 PRJNA914897 18341 402 1.395137 5.60845074 Aphthovirus reedi 3426400 Viruses Viruses 375 2.01e-99   NTclustered gi|1024264078|gb|KU168861.1| 2758980 g17919 i0 83.541 3.99502487562189 401 66 99 0 1 401 3867 4267 Bovine rhinitis B virus 4 isolate TCH5 polyprotein gene, complete cds blastn 1606 375 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Aphthovirus Aphthovirus reedi
13648500 13648500 PRJNA914897_P_NODE_29151_length_294_cov_1.045249_g28727_i0 PRJNA914897 29151 294 1.045249 3.07303206 Sichuan mosquito associated Iflaviridae 2864008 Viruses Viruses 544 3.69e-150   NTclustered gi|2099633539|gb|MZ556270.1| 2864008 g28727 i0 100 1.99659863945578 294 0 100 0 1 294 8642 8349 Sichuan mosquito associated Iflaviridae isolate mos092art01-10 genomic sequence blastn 587 544 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae   Sichuan mosquito associated Iflaviridae
14922739 14922739 PRJNA914897_P_NODE_17872_length_408_cov_1.608955_g17450_i0 PRJNA914897 17872 408 1.608955 6.5645364 Crinivirus ipomeae 3428114 Viruses Viruses 52.8 0.039   NTclustered gi|2073490320|gb|MW260351.1| 81931 g17450 i0 100 0.274509803921569 28 0 7 0 77 104 4086 4059 Sweet potato chlorotic stunt virus isolate 19-2043_2 segment 1 polyprotein (p227), RNA-dependent RNA polymerase (RdRp), suppressor of RNA silencing (RNaseIII), and hypothetical protein (p7) genes, complete cds blastn 112 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Crinivirus Crinivirus ipomeae
14922769 14922769 PRJNA914897_P_NODE_21472_length_361_cov_1.604167_g21048_i0 PRJNA914897 21472 361 1.604167 5.79104287 Dicistroviridae sp. 1955144 Viruses Viruses 309 1.84e-79   NTclustered gi|2756423170|gb|PP745375.1| 1955144 g21048 i0 82.173 1.18005540166205 359 64 99 0 1 359 3593 3235 MAG: Dicistroviridae sp. isolate 141_63846 genomic sequence blastn 426 309 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;