RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA914897" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA914897 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4723601 4723601 PRJNA914897_P_NODE_8804_length_646_cov_3.312391_g8394_i0 PRJNA914897 8804 646 3.312391 21.39804586 Megaviridae environmental sample 1737588 Viruses Viruses 60.2 3.84e-4   NTclustered gi|1758106775|gb|MN448285.1| 1737588 g8394 i0 88 0.0773993808049536 50 6 8 0 88 137 37557 37508 MAG: Megaviridae environmental sample isolate mPacV-611 clone mPacV-611_c2 blastn 50 60.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Megaviridae environmental sample
20021429 20021429 PRJNA914897_P_NODE_12956_length_506_cov_1.193995_g12534_i0 PRJNA914897 12956 506 1.193995 6.0416147 Raphidovirus japonicum 3432138 Viruses Viruses 58.4 0.001   NTclustered gi|1464309061|ref|NC_038553.1| 97195 g12534 i0 97.143 0.187747035573123 35 0 7 1 449 483 266521 266488 Heterosigma akashiwo virus 01 isolate HaV53, complete genome blastn 95 58.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Raphidovirus Raphidovirus japonicum
21296781 21296781 PRJNA914897_P_NODE_18317_length_402_cov_2.015198_g17895_i0 PRJNA914897 18317 402 2.015198 8.10109596 Marseillevirus LCMAC102 2506603 Viruses Viruses 54.7 0.011   NTclustered gi|1588059560|gb|MK500334.1| 2506603 g17895 i0 100 0.0721393034825871 29 0 7 0 147 175 151460 151432 MAG: Marseillevirus LCMAC102, sequence blastn 29 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Marseilleviridae   Marseillevirus LCMAC102

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;