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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA914897" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 15 ✖

bioproject 1

  • PRJNA914897 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2170230 2170230 PRJNA914897_P_NODE_22202_length_353_cov_1.850000_g21778_i0 PRJNA914897 22202 353 1.85 6.5305 Dictyostelium discoideum 44689 Evosea other_Eukaryota 84.2 1.18e-11   NTclustered gi|66816598|ref|XM_637217.1| 352472 g21778 i0 86.667 1.30594900849858 75 10 21 0 211 285 162 236 Dictyostelium discoideum AX4 Rab GTPase (rab1B) mRNA, complete cds blastn 461 84.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
4723306 4723306 PRJNA914897_P_NODE_11784_length_537_cov_1.575431_g11364_i0 PRJNA914897 11784 537 1.575431 8.46006447 Ripella sp. 805 1217113 Discosea other_Eukaryota 817 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g11364 i0 94.569 99.3929236499069 534 19 99 10 7 537 1 527 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 53374 817 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
5998000 5998000 PRJNA914897_P_NODE_11565_length_544_cov_1.698514_g11145_i0 PRJNA914897 11565 544 1.698514 9.23991616 Dictyostelium discoideum 44689 Evosea other_Eukaryota 60.2 3.2e-4   NTclustered gi|66826614|ref|XM_641570.1| 352472 g11145 i0 97.143 0.0643382352941176 35 1 6 0 466 500 1804 1838 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0270266) mRNA, complete cds blastn 35 60.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
7273028 7273028 PRJNA914897_P_NODE_20686_length_370_cov_2.464646_g20263_i0 PRJNA914897 20686 370 2.464646 9.1191902 Lamproderma scintillans 1115720 Evosea other_Eukaryota 344 5.18e-90   NTclustered gi|2306687673|gb|MZ234286.1| 1115720 g20263 i0 83.784 64.3432432432432 370 52 99 6 1 366 49 414 Lamproderma scintillans voucher LE297459 translation elongation factor EF-1 alpha (EF1A) gene, partial cds blastn 23807 344 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Lamproderma Lamproderma scintillans
16197962 16197962 PRJNA914897_P_NODE_9693_length_610_cov_0.824953_g9278_i0 PRJNA914897 9693 610 0.824953 5.0322132999999996 Acytostelium subglobosum 361139 Evosea other_Eukaryota 58.4 0.001   NTclustered gi|831759619|ref|XM_012894248.1| 1410327 g9278 i0 92.5 0.124590163934426 40 3 7 0 368 407 149 110 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 76 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
18746407 18746407 PRJNA914897_P_NODE_18375_length_401_cov_3.731707_g17953_i0 PRJNA914897 18375 401 3.731707 14.96414507 Ripella sp. GP2 1217115 Discosea other_Eukaryota 649 0   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g17953 i0 96.01 89.8154613466334 401 13 99 3 2 401 1073 675 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 36016 649 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
18746417 18746417 PRJNA914897_P_NODE_19755_length_382_cov_1.495146_g19333_i0 PRJNA914897 19755 382 1.495146 5.71145772 Dictyostelium discoideum 44689 Evosea other_Eukaryota 56.5 0.003   NTclustered gi|66819644|ref|XM_638390.1| 352472 g19333 i0 97.059 0.31151832460733 34 0 9 1 97 130 825 857 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0275677) mRNA, complete cds blastn 119 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
18746440 18746440 PRJNA914897_P_NODE_23215_length_343_cov_1.422222_g22791_i0 PRJNA914897 23215 343 1.422222 4.87822146 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 279 1.37e-70   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g22791 i0 81.556 35.3586005830904 347 56 100 6 1 343 2389 2047 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 12128 279 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18746487 18746487 PRJNA914897_P_NODE_29555_length_291_cov_1.009174_g29131_i0 PRJNA914897 29555 291 1.009174 2.93669634 Dictyostelium purpureum 5786 Evosea other_Eukaryota 394 3.89e-105   NTclustered gi|330791385|ref|XM_003283726.1| 5786 g29131 i0 91.065 99.9587628865979 291 26 100 0 1 291 54 344 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_91170), partial mRNA blastn 29088 394 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
20021537 20021537 PRJNA914897_P_NODE_27396_length_307_cov_1.645299_g26972_i0 PRJNA914897 27396 307 1.645299 5.05106793 Heterostelium album 2086695 Evosea other_Eukaryota 54.7 0.008   NTclustered gi|1160574332|ref|XM_020577344.1| 670386 g26972 i0 100 0.0944625407166124 29 0 9 0 182 210 71 43 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 29 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
20021661 20021661 PRJNA914897_P_NODE_3956_length_1004_cov_2.920516_g3668_i0 PRJNA914897 3956 1004 2.920516 29.32198064 Acytostelium subglobosum 361139 Evosea other_Eukaryota 54.7 0.028   NTclustered gi|831760677|ref|XM_012894574.1| 1410327 g3668 i0 100 0.0288844621513944 29 0 3 0 677 705 3634 3662 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 29 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
20021693 20021693 PRJNA914897_P_NODE_41836_length_242_cov_1.035503_g41412_i0 PRJNA914897 41836 242 1.035503 2.50591726 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 130 9.79e-26   NTclustered gi|470423488|ref|XM_004337555.1| 1257118 g41412 i0 82.051 51.6487603305785 156 24 64 4 85 238 367 520 Acanthamoeba castellanii str. Neff ribosomal protein L23, putative (ACA1_164710), partial mRNA blastn 12499 130 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20377276 20377276 PRJNA914897_P_NODE_17956_length_407_cov_1.613772_g17534_i0 PRJNA914897 17956 407 1.613772 6.56805204 root 1 Root_unresolved Root_unresolved 52.8 0.039   NTclustered gi|330802672|ref|XM_003289291.1| 5786 g17534 i0 100 0.936117936117936 28 0 7 0 194 221 285 258 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_98323), partial mRNA blastn 381 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
21296825 21296825 PRJNA914897_P_NODE_24577_length_331_cov_0.887597_g24153_i0 PRJNA914897 24577 331 0.887597 2.93794607 Platyamoeba placida 3454475 Discosea other_Eukaryota 411 4.459999999999999e-110   NTclustered gi|33946348|gb|AY294153.1| 197527 g24153 i0 89.091 100.075528700906 330 36 99 0 1 330 871 542 Platyamoeba placida actin mRNA, partial cds blastn 33125 411 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
23847218 23847218 PRJNA914897_P_NODE_33819_length_266_cov_1.880829_g33395_i0 PRJNA914897 33819 266 1.880829 5.00300514 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 191 4.940000000000001e-44   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g33395 i0 79.924 61.9887218045113 264 49 98 3 3 264 544 283 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 16489 191 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;