RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA911178" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA911178 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1250491 1250491 PRJNA911178_P_NODE_307181_length_213_cov_11.342857_g304707_i0 PRJNA911178 307181 213 11.342857 24.16028541 Metazoa 33208 Rotifera other_Eukaryota 387 4.52e-103   NTclustered gi|37785582|gb|AY210469.1| 96448 g304707 i0 99.528 99.0328638497653 212 1 99 0 1 212 2939 3150 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 21094 387 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
7270893 7270893 PRJNA911178_P_NODE_273606_length_245_cov_0.872093_g271132_i0 PRJNA911178 273606 245 0.872093 2.13662785 Adineta vaga 104782 Rotifera other_Eukaryota 370 5.38e-98   NTclustered gi|72153731|gb|DQ089739.1| 104782 g271132 i0 94.958 57.2408163265306 238 8 97 1 8 245 2380 2613 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 14024 370 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
8902934 8902934 PRJNA911178_P_NODE_22787_length_705_cov_27.675633_g20531_i0 PRJNA911178 22787 705 27.675633 195.11321265 Metazoa 33208 Rotifera other_Eukaryota 1218 0   NTclustered gi|37785582|gb|AY210469.1| 96448 g20531 i0 98.41 40.0822695035461 692 11 98 0 14 705 1841 2532 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 28258 1218 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
11454124 11454124 PRJNA911178_P_NODE_298189_length_236_cov_42.042945_g295715_i0 PRJNA911178 298189 236 42.042945 99.2213502 Metazoa 33208 Rotifera other_Eukaryota 375 1.1099999999999998e-99   NTclustered gi|37785582|gb|AY210469.1| 96448 g295715 i0 95.726 12.9533898305085 234 8 98 1 2 233 2954 2721 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 3057 375 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
17471541 17471541 PRJNA911178_P_NODE_61354_length_446_cov_29.442359_g58905_i0 PRJNA911178 61354 446 29.442359 131.31292114 Adineta vaga 104782 Rotifera other_Eukaryota 749 0   NTclustered gi|259129963|gb|GQ398061.1| 104782 g58905 i0 97.701 78.8004484304933 435 10 98 0 1 435 4588 4154 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 35145 749 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
20019436 20019436 PRJNA911178_P_NODE_286456_length_242_cov_1.153846_g283982_i0 PRJNA911178 286456 242 1.153846 2.79230732 Adineta vaga 104782 Rotifera other_Eukaryota 436 5.1499999999999985e-118   NTclustered gi|259129963|gb|GQ398061.1| 104782 g283982 i0 100 81.1446280991736 236 0 98 0 7 242 6716 6951 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 19637 436 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
21652609 21652609 PRJNA911178_P_NODE_308317_length_204_cov_19.106870_g305843_i0 PRJNA911178 308317 204 19.10687 38.9780148 Metazoa 33208 Rotifera other_Eukaryota 351 1.57e-92   NTclustered gi|37785582|gb|AY210469.1| 96448 g305843 i0 98.985 118.96568627451 197 1 96 1 2 197 1391 1195 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 24269 351 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;